Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02411 ATGGGATTGAAGCTTATTTTCCTGATAATTAAGCTACATTTTGTTATATGTACACCCCAGCTTCATGAATATACTGAGTCACCTACTGGAGTTCCAGCTAGTACTACTGCACTTCCACCTTCCAAGGCATCTTCTAGAATTCCCAGAAGTATTGCACTTTCACCTTCCCAATCATTCCCCAAAAGGAAATGGATGCACAGTTCTATGGACTCTCCAATTCCACACCACAAGCATCACCATTCCAGAAGAAAGTTCAGCAACCAAGCTCATGGACCAACCTTTCCAATCAACCCTCATACTCAACAAGGTCCTCCTCCTGTCTTCAAATCACAACATTCATTCTCTTCACCTATGAGCCGGGATTTACATGCACCTGCACCAGCACCAATAGTTCTATCACACCACTTGAATGTGCCCTCTACTTCACCTAGAATTTCACCTCTCGGTTCATCAGTGAAGAAGACAAGGACTCCACCACCAGCATATGCTTTGGTTCTACCATCTCCACCGCCTAACAAAGATTGTATGTCTCTGACATGCTCTGAGCCCTTGACATATACACTTCCTGGATCACCTTGTGGTTGTGTTTGGCCACTCCAAGTTAAACTTTGCATCAGCATTGCAATATACAAGTTTTTTCCTTTGGTTTCCAAGCTGGCCAAAGAAATTGCAGCTAGTGTTTTGCTGAACCATAATCAAGTACGCATTGTGGGAGCCGATGCAACTATTCAGCAGCTTGAGAAAACCACTGTTCTCATAAACTTGGTACCCCAAGGAGTGAAATTTGATGATACAACAGCTTTTTTAATATATAAGAAATTCTGGCAGAGAGAGATTCTCAATGATGCTTCTATCTTTGGTGCCTATGAAGTGCTCTATGTTCATTATCCAGGTCTTCCACCATCTCCACCTTCAAATGTTGACGGTATAGATGTTGAACCATACCCCAGTCACGACAACAATGGAACAATGATGAAACCTCTAGGAGTAGATATCTCAAGGAAGCAAAAAGAAGGGAGTGGTGGAAGAGTGGTTATTATGATCATCCTGTCATCTTTTACTGCCTTCTTTCTATTCATTGGATTTGCATGGCTTTTTCTATTGAAATGTGGTTCCTGCACTCTTGAACCTGAACATATTCCAGATGCCAAAATTCCATCCACTTCAAAGCAATCAGGTACTGCCAGTACTAGGTCATTGATTTATGCGAGCATGCCAGGTTCTAGATCAATGTCCTTCAGTTCTGGAACATTGATCCATGCAGGATCAGTTAAAATATTTACTTTGAATGAAATCGAGAAAGCAACAAATAACTTCAATTCTTCAAGCATACTAGGAAAAGGTGGCTTTGGTCTTGTTTATAAAGGTGACTTAAATGATGGCAGAGAGGTGGCTGTGAAGATTCTCAAAAGGGATGACCAGCATGGTGACCATGAATTCTTTGCAGAATCAGAGATGCTTAGTTGCTTGCACCATAGGAATTTGGTTAAACTGATAGGTATATGCACAGAAAAACAGAATCGCTGCTTAGTCTATGAGCTTGTCCCTAATGGCAGCGTGGAATCCCACTTACATGGTGTTGACAAGGAAACAGAACCACTTGATTGGAATGCCCGGATGAAGATTGCACTTGGTGCAGCTAGAGGATTAGCCTACCTTCATGAAGATTGTAATCCATGTGTCATACACAGGGACTTCAAATCCAGCAACATCTTATTGGAATATGATTTTATACCCAAAGTTTCAGATTTTGGCTTGGCTAGAACAACATTGAAGGAGGGAAACAAGCCCATCTCAACACATGTTATTGGAACATTTGGCTACGTAGCTCCTGAATATGCAATGACGGGACATCTTCTTGTCAAAAGTGATGTTTACAGCTATGGAGTTGTTCTCCTTGAGCTTCTAAGTGGAAGAAAGCCTGTGGATTTGTCCCAGCCACCAGGTCAAGAAAACCTTGTTGCTTGGGCTCGTCCACTTCTTACAAGCAAGGAGGGTTTGCAGAAGATCATAGACCCAGTTATGAAGCCTAGTGTTTCTGTTGATACCATTGTAAAGGTTGCAGCAATTGCATCCATGTGCGTGCAACCAGAAGTCACTCAGCGTCCTTTTATGGGTGAAGTTGTTCAGGCCTTGACACTGGTATGCAGTGAGTTTGAAGAAACAAGAGTTCTGTAA 2178 0.421 MGLKLIFLIIKLHFVICTPQLHEYTESPTGVPASTTALPPSKASSRIPRSIALSPSQSFPKRKWMHSSMDSPIPHHKHHHSRRKFSNQAHGPTFPINPHTQQGPPPVFKSQHSFSSPMSRDLHAPAPAPIVLSHHLNVPSTSPRISPLGSSVKKTRTPPPAYALVLPSPPPNKDCMSLTCSEPLTYTLPGSPCGCVWPLQVKLCISIAIYKFFPLVSKLAKEIAASVLLNHNQVRIVGADATIQQLEKTTVLINLVPQGVKFDDTTAFLIYKKFWQREILNDASIFGAYEVLYVHYPGLPPSPPSNVDGIDVEPYPSHDNNGTMMKPLGVDISRKQKEGSGGRVVIMIILSSFTAFFLFIGFAWLFLLKCGSCTLEPEHIPDAKIPSTSKQSGTASTRSLIYASMPGSRSMSFSSGTLIHAGSVKIFTLNEIEKATNNFNSSSILGKGGFGLVYKGDLNDGREVAVKILKRDDQHGDHEFFAESEMLSCLHHRNLVKLIGICTEKQNRCLVYELVPNGSVESHLHGVDKETEPLDWNARMKIALGAARGLAYLHEDCNPCVIHRDFKSSNILLEYDFIPKVSDFGLARTTLKEGNKPISTHVIGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDLSQPPGQENLVAWARPLLTSKEGLQKIIDPVMKPSVSVDTIVKVAAIASMCVQPEVTQRPFMGEVVQALTLVCSEFEETRVL* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02411 725 ProSiteProfiles Protein kinase domain profile. 439 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02411 725 PANTHER OS01G0750732 PROTEIN 167 720 - -
Phac5g02411 725 Gene3D Phosphorylase Kinase; domain 1 411 514 - -
Phac5g02411 725 Pfam Protein tyrosine and serine/threonine kinase 442 712 IPR001245 GO:0004672|GO:0006468
Phac5g02411 725 Gene3D Transferase(Phosphotransferase) domain 1 515 723 - -
Phac5g02411 725 ProSitePatterns Protein kinases ATP-binding region signature. 445 467 IPR017441 GO:0005524
Phac5g02411 725 MobiDBLite consensus disorder prediction 25 64 - -
Phac5g02411 725 MobiDBLite consensus disorder prediction 87 118 - -
Phac5g02411 725 MobiDBLite consensus disorder prediction 25 120 - -
Phac5g02411 725 SUPERFAMILY Protein kinase-like (PK-like) 419 713 IPR011009 -
Phac5g02411 725 FunFam Receptor-like serine/threonine-protein kinase ALE2 515 724 - -
Phac5g02411 725 FunFam receptor-like serine/threonine-protein kinase ALE2 412 514 - -
Phac5g02411 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 561 573 IPR008271 GO:0004672|GO:0006468
Phac5g02411 725 CDD STKc_IRAK 445 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02411 Phac-Chr5 42460947 42467471 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02411 77 725 Receptor kinase-like Gene Family AT5G56890 55.852 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Phac5g02411 PK_Tyr_Ser-Thr 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02411 - - gmx:100775318 1193.33