Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02405 ATGCATCACTCATTCTCCATGGCAACCAACCAAGTGAAAGACGCACCCAAAAGGTTCCAATACCCACTGGACTCTTCCTCCTACAAGATCCTCCACGAGATCGGCGCCGGCGTCAGCGCCGTCGTGTACAAAGCCATCTGCATCCCCATGAACTCCGCCGCGGTGGCAATCAAATCCATAGACCTGGACCGTTCCCGCCCCGACCTGGACGACGTTCGCCGCGAGGCCAAAACCCTCTCCCTCCTCTCTCACCCCAACATCCTCAAAGCACACTGCTCCTTCACCGTCGACCGCCGCCTGTGGGTGGTGATGCCCTTCATGGCCGCAGGATCTCTCCAATCCATCATCTCTCACTCCCACCCCAACGGCCTAACCGAACCCTGCATCGCGGTGGTTCTCAGAGACACCCTCAACGCCCTCTCCTACCTCCACGGGCAGGGCCACCTCCACCGCGACATAAAAGCCGGGAACATCCTCGTTGACACAAACGGACAAGTGAAGCTGGCGGATTTCGGCGTGTCGGCTTCGATCTACGAGTCCTCCACGTGTTCCTCTCTGAAGCTCACCGACGTTGCCGGCACGCCGTATTGGATGGCTCCTGAGGTGATTCACTCGCACACGGGGTACAGTTTGAAGGCTGATATATGGTCCTTTGGGATAACCGCATTGGAGCTGGCGCATGGAAGGCCTCCTCTCTCTCACCTTCCACCTTCCAAGTCCATGATGCTCAAGATCACAAAACGGTTTCGTTTCTCCGATTTGGATAAGTACAGAAAGGGGAACGGGAACAAGTTCTCGAAGGCGTTCAGGGACATGGTGGCTTCTTGTCTAGACCAAGATCCTTCTAGAAGGCCCTCTGCTGATAAGTTGCTGAAACACGCCTTTTTTAAAAACTGCAAGGGAAGTGATTTTGTGGTGAAGAACGTGCTCCAAGGGTTGCCCAGTGTGGAGAAAAGGTACAAGGAGAGCAAGGTTGTTGAGCATGATGATGATAATGATGATGATGACCCCGCCATGCAGGTGAAGGAGAGAAGGATCAGTGGGTGGAACTTCAACCAAGAGGGGTTGGAGTTTGATCCTGTGTTTCCAAACGATGATGCGGGGGCTAAAGAGGTTGTTGTTGGGTTTGGAGGAGAAACAGTTATGGAGGAGCATGTTAATGGTGGTGGTGGTGTGAAGAGGGAAAAGGTGTTGGCGACTCTGAATGTGCTGAAAGGGAGCTTGGAACAAGAGCTATTGGAAGTGAAGTTTCTGGTGAAAATGATAGGAGGAGAGGAGGAGAGTGATGATAGTGAGGAGAATGAGATTTCAAGGATGAGAGCTGCATTGGAAAATGAGAGGAAGAAGAACTTGCAGTTGGAGTTGCAACTCCACAACTGCAGGCTTCGTCTTTCTTCTCCTCTCAATGTTTAA 1413 0.5251 MHHSFSMATNQVKDAPKRFQYPLDSSSYKILHEIGAGVSAVVYKAICIPMNSAAVAIKSIDLDRSRPDLDDVRREAKTLSLLSHPNILKAHCSFTVDRRLWVVMPFMAAGSLQSIISHSHPNGLTEPCIAVVLRDTLNALSYLHGQGHLHRDIKAGNILVDTNGQVKLADFGVSASIYESSTCSSLKLTDVAGTPYWMAPEVIHSHTGYSLKADIWSFGITALELAHGRPPLSHLPPSKSMMLKITKRFRFSDLDKYRKGNGNKFSKAFRDMVASCLDQDPSRRPSADKLLKHAFFKNCKGSDFVVKNVLQGLPSVEKRYKESKVVEHDDDNDDDDPAMQVKERRISGWNFNQEGLEFDPVFPNDDAGAKEVVVGFGGETVMEEHVNGGGGVKREKVLATLNVLKGSLEQELLEVKFLVKMIGGEEESDDSEENEISRMRAALENERKKNLQLELQLHNCRLRLSSPLNV* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02405 470 SMART serkin_6 28 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02405 470 ProSitePatterns Protein kinases ATP-binding region signature. 34 58 IPR017441 GO:0005524
Phac5g02405 470 SUPERFAMILY Protein kinase-like (PK-like) 17 301 IPR011009 -
Phac5g02405 470 Gene3D Phosphorylase Kinase; domain 1 17 106 - -
Phac5g02405 470 ProSiteProfiles Protein kinase domain profile. 28 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02405 470 Pfam Protein kinase domain 28 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02405 470 Gene3D Transferase(Phosphotransferase) domain 1 110 346 - -
Phac5g02405 470 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 20 366 IPR047173 GO:0043539
Phac5g02405 470 Coils Coil 429 463 - -
Phac5g02405 470 FunFam Serine/threonine-protein kinase BLUS1 17 106 - -
Phac5g02405 470 FunFam Serine/threonine-protein kinase BLUS1 110 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02405 Phac-Chr5 42436595 42438342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02405 15 452 MAP Kinase Kinase Kinase Kinase AT4G14480 56.367 6.89e-180 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Phac5g02405 Pkinase 2.1e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02405 K08835 - gmx:100820227 726.087