Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02379 ATGGGTGCTTCGGGAAAATGGTTCAAGTCACTCATTCCTTTTCGAAAGACCTCAACTTCAACAACTGATCAAGAGAAGGGTGGTGAAAACAAGAGCAAGAAGAAATGGAAGCTATGGAGAGCTTCTTCAGAAGGGTCCAACGTGAAGAAAGTCGGTGATGCTGCTGTACCTGATTCTTCCTTTACTTATGCGGTGGCTGTGATGGTTCCCAAAGATTTCAAGCTCATCAAGCAGGAATGGGCTGCCATCCGCATTCAGGCTGTGTTTCGAGCCTTCTTGGCTAGACGAGCTTTGAGGGCCCTGAGGGCAGTGGTAAGGCTGCAAGCTATTTTTCGAGGCAGGCTTGTCAGAAAGCAAGCAGCTGTCACTCTGAGGTGTATGCAGGCTCTTCTTAGAGTTCAGGCGCATGTGAGGGCAAGGAATGTGAGGAATTCTCCTGAAGGGAAAGCAGTGCAGAAATTACTTAATGAATATCGCAACCTAGCTGATCCTTCTAAGGAAATTGAGCAAGGATGGTGTGATATTCCTGGAACCATGGATGAAGTTAAAGCAAAGCTAAGAATGAGGCAAGAAGGAGCTGTGAAGAGGGATAGAGCAATGGCATACTCTCTCTCCACACAGCAGTCAAGACTGGTCGCCAGTCCAAATCCTAAAGCCACTAAGGCGTTGACTCCTCTCAAGCATCACAATCTAAACAATAAGAGCTTAGGATGTAGCTTGTTAGAACGCTGGATGGAGACCAAGCCTTGGGAGAGTCCAATCTATAGGAAGAGTGAAGACCTTGTTCCTGTTTTTCAATCAAGAAAGAATGGTGTGACATCCAGGATTTCAGCAGTTAAACCTCCAATAACCAGCCAATCCACTCCATCATCTTCGGCCATAAGCTCTGAATGCATGTGTGATGATAGCCCTGTGTCAACTTCTTATACAGCTGGATCTCCATCTTTTCCATCCACCAATACTGTTTTAATGGAAGCAACAGAGGAAAGAGATGTTCATCAACCAAGCTACATGAATTTGACAGAATCAACCAGGGCTAAACTGAAAACTTGCAGGAGTTCTTCACAGAATTCAAAGAGTCTTGTAATGGAGGAGTGTGTGTCTCACAGCACAACCTCAGGTTTGATAAATGGAGATTCTAGAAGCAGTTCTAATTCTGACCCTTCAGTTAACTTATGGAAGGATTCTTGTGCAACACCTCTGAGGGCAAGTTATCAAAAACGACAAATTGGGGTATGA 1239 0.4487 MGASGKWFKSLIPFRKTSTSTTDQEKGGENKSKKKWKLWRASSEGSNVKKVGDAAVPDSSFTYAVAVMVPKDFKLIKQEWAAIRIQAVFRAFLARRALRALRAVVRLQAIFRGRLVRKQAAVTLRCMQALLRVQAHVRARNVRNSPEGKAVQKLLNEYRNLADPSKEIEQGWCDIPGTMDEVKAKLRMRQEGAVKRDRAMAYSLSTQQSRLVASPNPKATKALTPLKHHNLNNKSLGCSLLERWMETKPWESPIYRKSEDLVPVFQSRKNGVTSRISAVKPPITSQSTPSSSAISSECMCDDSPVSTSYTAGSPSFPSTNTVLMEATEERDVHQPSYMNLTESTRAKLKTCRSSSQNSKSLVMEECVSHSTTSGLINGDSRSSSNSDPSVNLWKDSCATPLRASYQKRQIGV* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02379 412 MobiDBLite consensus disorder prediction 17 37 - -
Phac5g02379 412 MobiDBLite consensus disorder prediction 371 391 - -
Phac5g02379 412 ProSiteProfiles IQ motif profile. 102 129 IPR000048 GO:0005515
Phac5g02379 412 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 120 IPR027417 -
Phac5g02379 412 ProSiteProfiles IQ motif profile. 78 106 IPR000048 GO:0005515
Phac5g02379 412 Gene3D - 77 119 - -
Phac5g02379 412 Pfam IQ calmodulin-binding motif 102 119 IPR000048 GO:0005515
Phac5g02379 412 Pfam IQ calmodulin-binding motif 80 99 IPR000048 GO:0005515
Phac5g02379 412 PANTHER IQ-DOMAIN 5-RELATED 1 385 - -
Phac5g02379 412 SMART iq_5 77 99 IPR000048 GO:0005515
Phac5g02379 412 SMART iq_5 100 121 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02379 Phac-Chr5 42331341 42333853 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02379 1 392 IQD Protein Family AT2G26180 44.365 1.29e-90 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02379 - - gmx:100788715 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02379 5 42331341 42333853 Phac10g01820 10 40804046 40806496 PCT