Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02378 ATGGGTGCTTCGGGAAAATGGTTCAAGTCACTCATTCCTTTTCGAAAGACCTCAACTTCAACAACTGATCAAGAGAAGGGTGGTGAAAACAAGAGCAAGAAGAAATGGAAGCTATGGAGAGCTTCTTCAGAAGGGTCCAACGTGAAGAAAGTCGGTGATGCTGCTGTACCTGATTCTTCCTTTACTTATGCGGTGGCTGTGATGGTTCCCAAAGATTTCAAGCTCATCAAGCAGGAATGGGCTGCCATCCGCATTCAGGCTGTGTTTCGAGCCTTCTTGGCTAGACGAGCTTTGAGGGCCCTGAGGGCAGTGGTAAGGCTGCAAGCTATTTTTCGAGGCAGGCTTGTCAGAAAGCAAGCAGCTGTCACTCTGAGGTGTATGCAGGCTCTTCTTAGAGTTCAGGCGCATGTGAGGGCAAGGAATGTGAGGAATTCTCCTGAAGGGAAAGCAGTGCAGAAATTACTTAATGAATATCGCAACCTAGCTGATCCTTCTAAGGAAATTGAGCAAGGATGGTGTGATATTCCTGGAACCATGGATGAAGTTAAAGCAAAGCTAAGAATGAGGCAAGAAGGAGCTGTGAAGAGGGATAGAGCAATGGCATACTCTCTCTCCACACAGTCAAGACTGGTCGCCAGTCCAAATCCTAAAGCCACTAAGGCGTTGACTCCTCTCAAGCATCACAATCTAAACAATAAGAGCTTAGGATGTAGCTTGTTAGAACGCTGGATGGAGACCAAGCCTTGGGAGAGTCCAATCTATAGGAAGAGTGAAGACCTTGTTCCTGTTTTTCAATCAAGAAAGAATGGTGTGACATCCAGGATTTCAGCAGTTAAACCTCCAATAACCAGCCAATCCACTCCATCATCTTCGGCCATAAGCTCTGAATGCATGTGTGATGATAGCCCTGTGTCAACTTCTTATACAGCTGGATCTCCATCTTTTCCATCCACCAATACTGTTTTAATGGAAGCAACAGAGGAAAGAGATGTTCATCAACCAAGCTACATGAATTTGACAGAATCAACCAGGGCTAAACTGAAAACTTGCAGGAGTTCTTCACAGAATTCAAAGAGTCTTGTAATGGAGGAGTGTGTGTCTCACAGCACAACCTCAGGTTTGATAAATGGAGATTCTAGAAGCAGTTCTAATTCTGACCCTTCAGTTAACTTATGGAAGGATTCTTGTGCAACACCTCTGAGGGCAAGTTATCAAAAACGACAAATTGGGGTATGA 1236 0.4482 MGASGKWFKSLIPFRKTSTSTTDQEKGGENKSKKKWKLWRASSEGSNVKKVGDAAVPDSSFTYAVAVMVPKDFKLIKQEWAAIRIQAVFRAFLARRALRALRAVVRLQAIFRGRLVRKQAAVTLRCMQALLRVQAHVRARNVRNSPEGKAVQKLLNEYRNLADPSKEIEQGWCDIPGTMDEVKAKLRMRQEGAVKRDRAMAYSLSTQSRLVASPNPKATKALTPLKHHNLNNKSLGCSLLERWMETKPWESPIYRKSEDLVPVFQSRKNGVTSRISAVKPPITSQSTPSSSAISSECMCDDSPVSTSYTAGSPSFPSTNTVLMEATEERDVHQPSYMNLTESTRAKLKTCRSSSQNSKSLVMEECVSHSTTSGLINGDSRSSSNSDPSVNLWKDSCATPLRASYQKRQIGV* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02378 411 MobiDBLite consensus disorder prediction 17 37 - -
Phac5g02378 411 ProSiteProfiles IQ motif profile. 102 129 IPR000048 GO:0005515
Phac5g02378 411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 120 IPR027417 -
Phac5g02378 411 Pfam IQ calmodulin-binding motif 102 119 IPR000048 GO:0005515
Phac5g02378 411 Pfam IQ calmodulin-binding motif 80 99 IPR000048 GO:0005515
Phac5g02378 411 ProSiteProfiles IQ motif profile. 78 106 IPR000048 GO:0005515
Phac5g02378 411 MobiDBLite consensus disorder prediction 370 390 - -
Phac5g02378 411 Gene3D - 77 119 - -
Phac5g02378 411 PANTHER IQ-DOMAIN 5-RELATED 1 384 - -
Phac5g02378 411 SMART iq_5 77 99 IPR000048 GO:0005515
Phac5g02378 411 SMART iq_5 100 121 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02378 Phac-Chr5 42331341 42333853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02378 1 391 IQD Protein Family AT2G26180 44.365 1.07e-88 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02378 - - gmx:100788715 621.313