Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02377 ATGGGGCATCACTCTTGCTGCAACAAGCAGAAGGTCAAAAGGGGACTATGGTCACCTGAAGAAGATGAAAAACTCATCAACTACATCACAACTTATGGACACGGCTGCTGGAGTTCAGTCCCAAAACTTGCAGGCCTGCAGAGGTGTGGAAAGAGCTGCAGATTGAGATGGATAAATTATCTAAGACCTGATTTGAAACGGGGAAGCTTTTCTCCTCAAGAAGCAGCACTCATTATAGAACTTCATAGTATTCTTGGCAACAGGTGGGCTCAGATAGCCAAGCACCTACCTGGAAGAACAGATAATGAGGTGAAGAACTTTTGGAATTCAAGCATAAAGAAGAAGCTGCTTTCTCATGATGTTGTTCCTTCTTTAGCCACATTTTCTGATATTCACAGTCTTGCCAATGCTTCCATGGAAAGTTTCTTCCCTTTAACTGACAACACTATCCTAAACTCCCATCATCAATACCTTCCCATCATCCCAGCCCCAATCCTACAAGCCTTTGATCATCTCAACAATGATATCAAGATTCACATAAACAACAACTATAATAATAATAATAATGCCAACAATTTCCTTCCTTTTCAGAATCCAATGCCAGAAACAGTGCCACCATCCAACAACATCATTCCATCTTTGTATGAATTAGATACATGGTCCTCCTTGGGGTGTGAACCCATTCATCTTGATCCAAATCAAGAAACTCAAACAATCATCACCAAAAGTGATACCATCGTTGAGAAATTCATCAATCCAACTACATGGGTGGAACCGACCATTGATATTCTGCCAAAAGTGTGTGAGAGCATCGAGGATTACGTCTGCAGCATCCCATTTTCTTCTTCTGCCAATTCACTACACAAACATGAGGATGCTGTTGCGTGTTACACACCAGGCATTCGTGCACAAGATCAAATTGCTGTACCCAATCAAGTGGAGTACATTGATGCCATCATCATGTCGTCGTTTTCATCCTCCTCCACCCTAAACCCTAAATCATCAACAACATCAGCAACATCATCACTCTATCAAGCAGAAAAATAG 1047 0.4155 MGHHSCCNKQKVKRGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHDVVPSLATFSDIHSLANASMESFFPLTDNTILNSHHQYLPIIPAPILQAFDHLNNDIKIHINNNYNNNNNANNFLPFQNPMPETVPPSNNIIPSLYELDTWSSLGCEPIHLDPNQETQTIITKSDTIVEKFINPTTWVEPTIDILPKVCESIEDYVCSIPFSSSANSLHKHEDAVACYTPGIRAQDQIAVPNQVEYIDAIIMSSFSSSSTLNPKSSTTSATSSLYQAEK* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02377 348 PANTHER MYB DOMAIN PROTEIN 55 1 229 - -
Phac5g02377 348 SMART sant 66 114 IPR001005 -
Phac5g02377 348 SMART sant 13 63 IPR001005 -
Phac5g02377 348 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac5g02377 348 Gene3D - 69 116 - -
Phac5g02377 348 FunFam MYB transcription factor 6 66 - -
Phac5g02377 348 CDD SANT 17 61 IPR001005 -
Phac5g02377 348 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac5g02377 348 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Phac5g02377 348 FunFam Myb transcription factor 69 116 - -
Phac5g02377 348 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac5g02377 348 MobiDBLite consensus disorder prediction 326 348 - -
Phac5g02377 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phac5g02377 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac5g02377 348 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Phac5g02377 348 CDD SANT 69 109 IPR001005 -
Phac5g02377 348 Gene3D - 11 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02377 Phac-Chr5 42316447 42318548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02377 1 118 MYB Transcription Factor Family AT3G13890 96.610 4.81e-82 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac5g02377 Myb_DNA-binding 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02377 K09422 - gmx:102662609 526.939