Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02356 ATGAATTGCTTGTGTGAGAAAGACTGTGGTCTATTTTCTTCTCATTCAACATCACCCAATGTTCTTGGATGCCCATCATGGGGGCCTTCAGAATCCAGAAGTTTGAGCTTAAAAGTGGATGTTCTGCCACAACAATGCCACAGGACCAAAACATTGATCTTTCAATTCCAAGAACTGGATTCATCTTCGACTCATTCGGGTCAATCTTCTACCAAACTTGGTTCATCACAATCCGGTCAAATGTCTGTTCAGCATAGCTCTACAGATTCAACACATGGCATCAGATCATTTATGGGGAATCAGGATTTCACCTTCCCTCCTCCACTACCGGATCACAGCCAAACACTTGCTCATATTGCAGGTCACTATGCTGATCCAGGCTATAGCAGCCTAATGGCTTCTTCATATGGTTCACAGTTTAAGCCAGTGGAAACTGCTCCTATTCGAATTCCTCTGCAATTGGACATCACAGAAGAACCCATATACGTGAATTCAAAGCAGTACCATGCTATTCTGAGGCGAAGGCAGAATCGAGCAAAACTTGAAGTACAAAACAAACCCATCAAGGATCGGAAAGTAATAAGCGTGTCTATGTTTTCTCTCTACCATTTCTCTTTAACCAAACTAAGAACACTGTGA 639 0.4241 MNCLCEKDCGLFSSHSTSPNVLGCPSWGPSESRSLSLKVDVLPQQCHRTKTLIFQFQELDSSSTHSGQSSTKLGSSQSGQMSVQHSSTDSTHGIRSFMGNQDFTFPPPLPDHSQTLAHIAGHYADPGYSSLMASSYGSQFKPVETAPIRIPLQLDITEEPIYVNSKQYHAILRRRQNRAKLEVQNKPIKDRKVISVSMFSLYHFSLTKLRTL* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02356 212 MobiDBLite consensus disorder prediction 62 91 - -
Phac5g02356 212 Gene3D - 157 205 - -
Phac5g02356 212 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 44 192 IPR001289 GO:0003700|GO:0006355
Phac5g02356 212 ProSitePatterns NF-YA/HAP2 subunit signature. 162 182 IPR018362 GO:0003677|GO:0016602
Phac5g02356 212 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 159 192 IPR001289 GO:0003700|GO:0006355
Phac5g02356 212 ProSiteProfiles NF-YA/HAP2 family profile. 157 192 IPR001289 GO:0003700|GO:0006355
Phac5g02356 212 SMART cbf3 156 211 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02356 Phac-Chr5 42203769 42206005 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02356 14 192 CCAAT-HAP2 Transcription Factor Family AT1G17590 38.974 1.56e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Phac5g02356 CBFB_NFYA 2.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02356 K08064 - gmx:100803893 275.404