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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Phac5g02354
ATGAATTGCTTGTGTGAGAAAGACTGTGGTCTATTTTCTTCTCATTCAACATCACCCAATGTTCTTGGATGCCCATCATGGGGGCCTTCAGAATCCAGAAGTTTGAGCTTAAAAGTGGATGTTCTGCCACAACAATGCCACAGGACCAAAACATTGATCTTTCAATTCCAAGAACTGGATTCATCTTCGACTCATTCGGGTCAATCTTCTACCAAACTTGGTTCATCACAATCCGGTCAAATGTCTGTTCAGCATAGCTCTACAGATTCAACACATGGCATCAGATCATTTATGGGGAATCAGGATTTCACCTTCCCTCCTCCACTACCGGATCACAGCCAAACACTTGCTCATATTGCAGGTCACTATGCTGATCCAGGCTATAGCAGCCTAATGGCTTCTTCATATGGTTCACAGTTTAAGCCAGTGGAAACTGCTCCTATTCGAATTCCTCTGCAATTGGACATCACAGAAGAACCCATATACGTGAATTCAAAGCAGTACCATGCTATTCTGAGGCGAAGGCAGAATCGAGCAAAACTTGAAGTACAAAACAAACCCATCAAGGATCGGAAACCTTATCTTCACGAGTCCCGCCATCTGCATGCACTGAAGAGAGCAAGAGGAGCTGGTGGACGCTTTCTCAACACTAAAAAGCTTCAACAATCAACTCGTACACGTGGAAATATTGCAGAATCTAGCATGCATCACATGGAAAACTACAGAGATGGTGATGACAATGCCACATATGCTTCTAACAGTGATGCAAGAAACATGCAGAATCATACATCTGATAAGGGTGGTGGCACCACTCAGCAGCACCCTCTATTTGTCTACATGTGA
843
0.4377
MNCLCEKDCGLFSSHSTSPNVLGCPSWGPSESRSLSLKVDVLPQQCHRTKTLIFQFQELDSSSTHSGQSSTKLGSSQSGQMSVQHSSTDSTHGIRSFMGNQDFTFPPPLPDHSQTLAHIAGHYADPGYSSLMASSYGSQFKPVETAPIRIPLQLDITEEPIYVNSKQYHAILRRRQNRAKLEVQNKPIKDRKPYLHESRHLHALKRARGAGGRFLNTKKLQQSTRTRGNIAESSMHHMENYRDGDDNATYASNSDARNMQNHTSDKGGGTTQQHPLFVYM*
281
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Phac5g02354
280
PRINTS
CCAAT-binding transcription factor subunit B signature
160
182
IPR001289
GO:0003700|GO:0006355
Phac5g02354
280
PRINTS
CCAAT-binding transcription factor subunit B signature
191
214
IPR001289
GO:0003700|GO:0006355
Phac5g02354
280
ProSiteProfiles
NF-YA/HAP2 family profile.
157
217
IPR001289
GO:0003700|GO:0006355
Phac5g02354
280
Pfam
CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
159
214
IPR001289
GO:0003700|GO:0006355
Phac5g02354
280
MobiDBLite
consensus disorder prediction
62
91
-
-
Phac5g02354
280
SMART
cbf3
156
217
IPR001289
GO:0003700|GO:0006355
Phac5g02354
280
Gene3D
-
157
218
-
-
Phac5g02354
280
MobiDBLite
consensus disorder prediction
246
271
-
-
Phac5g02354
280
ProSitePatterns
NF-YA/HAP2 subunit signature.
162
182
IPR018362
GO:0003677|GO:0016602
Phac5g02354
280
PANTHER
TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED
44
264
IPR001289
GO:0003700|GO:0006355
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Phac5g02354
Phac-Chr5
42202258
42206005
Dispersed/Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Phac5g02354
14
263
CCAAT-HAP2 Transcription Factor Family
AT1G17590
40.925
1.01e-45
155
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
NF-YA
Phac5g02354
CBFB_NFYA
2.9e-25
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Phac5g02354
K08064
-
gmx:100803893
410.994
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