Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02330 ATGCACTTAAGTCCTTACACCACCACCACTCCAAAGAAGCCATCACCACAATCCAACCACCACCACCACCATAATAACAACATTGTTCATGAAGCTGCAGCGTTAGATAACAACAACAACAACACCATGCATCGCAGCAACCAGAGCCACACATCCACCAGCCGTTCTTCGGACTCCACCGAGCCCAACGAAGATGGAAAATGGGCACCCAAGCTTCTCAGAGAGTGTGCAAAAGCAATATCAGAGCGAGACTCCACCAAAACGCACCACCTTCTGTGGATGCTCAACGAGCTCGCTTCGCCCTACGGCGACTGCGATCAAAAACTCGCCTCTTACTTCCTGCAAGCCTTGTTCTGCAGAGCCACCGAGTCCGGCGAGAGATGCTACAAGACGCTCTCCTCCGTGGCGGAGAAGAGCCACTCCTTCGACTCCGCCAGGAGGTTGATTCTCAAGTTCCAGGAGGTGAGCCCGTGGACCACGTTCGGACACGTGGCGTCCAACGGCGCCATCTTGGAGGCCTTGGAGGGAGAGCCCAAGCTCCACATCATCGATCTCAGCAACACGCTTTGCACGCAGTGGCCTACTCTGTTGGAAGCGTTGGCCACGCGGAACGACGAAACGCCGCACCTCAAACTCACGGTGGTGGCGCTCGCGGGGTCGGTGATGAAGGAGGTCGGTCAACGGATGGAGAAGTTCGCGAGGCTCATGGGCGTGCCGTTTGAATTCAACGTGATAAGCGGCTTCAGGGATCTCACGAAAGAAGGGTTGGGGGTTCAGGAAGACGAAGCGATCGCCGTGAATTGCGTGGGGGCGTTGAGAAGAGTGGAGGTTGAAGAGAGGGAAAACTTGATTCGCGTGTTCAAGTCGCTCGGTCCGAAAGTGGTGACCGTTGTTGAGGAAGAAGCTGATTTTTGCAGCTGGAGGGAGGATTTGGTGAAGTGCTTGGAGGAGTGCCTGAGGTTCTACTCTCTGTACTTCGAGATGCTGGAGGAGAGTTTTCCGGCGACGAGCAACGAGAGGTTGATGTTGGAGAGGGAGTGTTCGAGGAGCATAGTTAGGGTTTTGGCATGCTGTGATGATTTGGAAGATGATGGAGAGTGTTGTGAGAGGAGGGAGAGAGGAACGCAGTGGTGTGAGAGGCTGAGGAATGCGTTTTCGCCGGTGGGATTCAGCGATGATGTGGTGGATGATGTGAAAGCATTGCTCAAGAGGTACCAACCAGGGTGGTCACTTCTGCTGTCTCAGGGTGATGATCATCTCTCAGGGATTTACTTGACATGGAAGGAGGAACCAGTCGTTTGGGCTTCAGCATGGAAACCCTAG 1323 0.5427 MHLSPYTTTTPKKPSPQSNHHHHHNNNIVHEAAALDNNNNNTMHRSNQSHTSTSRSSDSTEPNEDGKWAPKLLRECAKAISERDSTKTHHLLWMLNELASPYGDCDQKLASYFLQALFCRATESGERCYKTLSSVAEKSHSFDSARRLILKFQEVSPWTTFGHVASNGAILEALEGEPKLHIIDLSNTLCTQWPTLLEALATRNDETPHLKLTVVALAGSVMKEVGQRMEKFARLMGVPFEFNVISGFRDLTKEGLGVQEDEAIAVNCVGALRRVEVEERENLIRVFKSLGPKVVTVVEEEADFCSWREDLVKCLEECLRFYSLYFEMLEESFPATSNERLMLERECSRSIVRVLACCDDLEDDGECCERRERGTQWCERLRNAFSPVGFSDDVVDDVKALLKRYQPGWSLLLSQGDDHLSGIYLTWKEEPVVWASAWKP* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02330 440 Pfam GRAS domain family 71 439 IPR005202 -
Phac5g02330 440 MobiDBLite consensus disorder prediction 1 15 - -
Phac5g02330 440 ProSiteProfiles GRAS family profile. 60 439 IPR005202 -
Phac5g02330 440 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 58 428 IPR005202 -
Phac5g02330 440 MobiDBLite consensus disorder prediction 1 23 - -
Phac5g02330 440 MobiDBLite consensus disorder prediction 38 59 - -
Phac5g02330 440 MobiDBLite consensus disorder prediction 38 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02330 Phac-Chr5 42092926 42094619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02330 44 440 GRAS Transcription Factor Family AT4G37650 51.544 2.74e-144 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac5g02330 GRAS 6.6e-94 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02330 - - gmx:100818806 732.25