Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02318 ATGGATAAGGACAAATCTCTAGGTCACGGTGGAGGTTTGCCACCTCCCTCGGGGCGTTATTCGGGTTACTCGCCCACCGGAACTGTGTTTAGTGTGAAATCTGAGCCACCGTCGTCGTCGTCGACGTCGTCGTATCCGCCACTGGCCCCGGGAATTTCCGCGCCGGAGTCTAGTGGGTTTAGTCATGATATTAGCAGAATGTCCGATAATCCGCCGAGAAATAGAGGTCATAGGCGTGCTCATTCCGAGATTCTTACCCTACCGGATGATATTAGCTTTGACAGTGACCTTGGTGTGGTTGGAGGTGCCGATGGACCTTCCTTCTCCGATGAAGCCGAGGAGGACTTGCTGTCCATGTACCTTGATATGGATAAGTTCAATTCGTCGTCGGCGACGTCAACGTTTCAAATGGGCGAACCGTCTAGCGCAATGGGAGCGTCGGGTTCGGCATCAGCATCAGGGGCAGCCACCTCTTCTGCAGAGAATATTGCTGTTGGTACTCATGAACGTCCCAGAGTTAGACACCAGCATAGTCAATCCATGGATGGATCAACTACCATAAAGCCTGAGATGCTGGTTTCTGGTTCCGAAGACTTGTCTGCGGCAGATTCCAAAAAGGCAATGTCAGCTGCTAAGCTTGCTGAGCTTGCCTTGATTGACCCCAAACGTGCGAAAAGGATATGGGCAAATAGACAGTCTGCTGCTAGGTCAAAAGAGAGGAAGATGCGGTATATTGCTGAGCTTGAAAGGAAGGTACAAACATTGCAAACGGAAGCAACATCTTTGTCTGCACAATTAAGTCTCTTGCAGAGGGATACAAATGGCTTGAATTCTGAGAACAGTGAACTGAAGCTGCGGTTACAAACCATGGAGCAACAAGTTCACTTGCAAGATGCACTAAATGACGCATTAAAAGAGGAAATTCAGCATTTGAAAATACTGACTGGACAAGCTATGCCACCTAATGGAGGAGGACCTATGCTGAACTTTGCCTCTTATGGAGGGGGACAGCAATTCTATCCTAATAATCATGCCATGCACACCCTTTTAGCTGCACAGCAGTTTCAACAACTCCAAATTCATCCTCAGAAGCAGCATCAGTTTCAGCAGCTTCAACAGCAACAAATGCTGCAACAACAACAGCAACAGCAGCAGCAACAACAGCAGCAGCAACAACAGCAGAGGGAACAGCAGCACCAACAATCAACCGACTTGAAAATGAGAGAAGCTTCACCTGCTCTATGTTCCAAAGACAATGCGTTGTCAGATGTAAATCCTTCAGGAGCTAAGGACTGTTGA 1299 0.4819 MDKDKSLGHGGGLPPPSGRYSGYSPTGTVFSVKSEPPSSSSTSSYPPLAPGISAPESSGFSHDISRMSDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDEAEEDLLSMYLDMDKFNSSSATSTFQMGEPSSAMGASGSASASGAATSSAENIAVGTHERPRVRHQHSQSMDGSTTIKPEMLVSGSEDLSAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLSLLQRDTNGLNSENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKILTGQAMPPNGGGPMLNFASYGGGQQFYPNNHAMHTLLAAQQFQQLQIHPQKQHQFQQLQQQQMLQQQQQQQQQQQQQQQQQREQQHQQSTDLKMREASPALCSKDNALSDVNPSGAKDC* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02318 432 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 36 402 - -
Phac5g02318 432 Coils Coil 371 401 - -
Phac5g02318 432 Coils Coil 238 307 - -
Phac5g02318 432 MobiDBLite consensus disorder prediction 130 188 - -
Phac5g02318 432 CDD bZIP_plant_RF2 223 272 IPR044759 GO:0003700|GO:0006355
Phac5g02318 432 SUPERFAMILY Leucine zipper domain 222 273 IPR046347 GO:0003700|GO:0006355
Phac5g02318 432 MobiDBLite consensus disorder prediction 130 164 - -
Phac5g02318 432 FunFam probable transcription factor PosF21 221 274 - -
Phac5g02318 432 Pfam bZIP transcription factor 222 280 IPR004827 GO:0003700|GO:0006355
Phac5g02318 432 MobiDBLite consensus disorder prediction 68 85 - -
Phac5g02318 432 MobiDBLite consensus disorder prediction 383 432 - -
Phac5g02318 432 MobiDBLite consensus disorder prediction 1 87 - -
Phac5g02318 432 SMART brlzneu 218 282 IPR004827 GO:0003700|GO:0006355
Phac5g02318 432 Gene3D - 221 274 - -
Phac5g02318 432 MobiDBLite consensus disorder prediction 21 48 - -
Phac5g02318 432 MobiDBLite consensus disorder prediction 383 407 - -
Phac5g02318 432 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 220 283 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02318 Phac-Chr5 42031924 42035958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02318 19 352 bZIP Transcription Factor Family AT1G06070 72.537 9.48e-170 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac5g02318 bZIP_1 2.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02318 - - gmx:100786738 579.326