Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02251 ATGGCAGCAGCAAGGGTGGATCAAACAAAAACAAACGAGGTTGTTCCATCTCTCTCTATCTCTCTCTCTCTTAACGAAATGGCAGAGGAACTTGACCTGGACAACCTGAAGGCACTGAAAGTTTTAGGCAAAGGAGCCATGGGCACCGTGTTTCTCGTGCAACACAACTCCTACCATGTCGCACTCAAAGTCGTTGACAAATCATCATCCCTCCACGACGGTGCTCGCCGCGCCCACTGGGAAATCACCGTTCTCTCTCGCTTATCCCACCCCTTCCTCCCCACCCTACTGGGTTCCTTCGAGTCCAACAGCTTAATGGGCTGGGCAGTCCCCTACTGCCCCGGCGGCGACCTCAACCACCTCCGCTACCGCCAAACAGACCACGTATTCTCCCCCGCCGTCGTCCGCTTCTACCTCGCCGAGATCCTCTGCGCCCTCCACCACCTCCACTCCATGCACATCGCATACCGCGACCTCAAACCCGAAAACGTCCTCATCCAACAATCTGGCCACGTCACCCTCACCGACTTCGACCTCTCCAGAACCCTCTCTCCCACCAAAACCAACACCTCTCCCTCCAAACCCCACATTCCCGACGCCGCTCCACGCAAACCCCGCCGCAACTTCCGCTGGGCCCCACTCGCCAAGGCCCCCAAGTCCGCCCGAGTCACCCCCGCCGCTCGCCGCGCCGCGCTGAGCTTCGAGCGCTCGAAGTCGTTCGTGGGCACCGAGGAGTACATCGCGCCGGAGGTCCTCCGAGGCGAGGGGCACGGCTTCGCCGTCGACTGGTGGGCCCTCGGCGTCCTCGCCCACGAGATGGTCTACGGAACGACGCCGTTCAAGGGGAAGAATCGCAAGGAAACGTTTCGCAACGTGTTGTTGAAGACGCCCGAGTTTGTTGGGAAGAAAACAGCGTTGACGGACCTAATCTCTCAGTTGCTCGAAAAGGACCCTTCCAAGCGTTTGGGTTATGTTCGCGGCGCCACCGAGATCAAGGAGCACGAGTTCTTCAGAGGCGTTAAGTGGGACCTACTAACGGAGGTTATGCGGCCGCCGTTTATTCCTTCAAGAGACGACGTCACGATGCCTTTCGCCGATGGACTCGACATAAGGGGATACTTCCAGAGCTTGAAATCTCCGCCGTCTTTGCCCCCTTCGCCGTTACGGTCACCGTCGTTTGAGTTTCAGAAGAATGTTTCTTTACCGGAATTCTGA 1215 0.5811 MAAARVDQTKTNEVVPSLSISLSLNEMAEELDLDNLKALKVLGKGAMGTVFLVQHNSYHVALKVVDKSSSLHDGARRAHWEITVLSRLSHPFLPTLLGSFESNSLMGWAVPYCPGGDLNHLRYRQTDHVFSPAVVRFYLAEILCALHHLHSMHIAYRDLKPENVLIQQSGHVTLTDFDLSRTLSPTKTNTSPSKPHIPDAAPRKPRRNFRWAPLAKAPKSARVTPAARRAALSFERSKSFVGTEEYIAPEVLRGEGHGFAVDWWALGVLAHEMVYGTTPFKGKNRKETFRNVLLKTPEFVGKKTALTDLISQLLEKDPSKRLGYVRGATEIKEHEFFRGVKWDLLTEVMRPPFIPSRDDVTMPFADGLDIRGYFQSLKSPPSLPPSPLRSPSFEFQKNVSLPEF* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02251 404 Gene3D Transferase(Phosphotransferase) domain 1 234 356 - -
Phac5g02251 404 Gene3D Phosphorylase Kinase; domain 1 36 116 - -
Phac5g02251 404 FunFam Serine/threonine-protein kinase OXI1 235 356 - -
Phac5g02251 404 Pfam Protein kinase domain 38 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02251 404 Gene3D Transferase(Phosphotransferase) domain 1 117 190 - -
Phac5g02251 404 FunFam Serine/threonine-protein kinase OXI1 117 185 - -
Phac5g02251 404 ProSiteProfiles Protein kinase domain profile. 36 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02251 404 MobiDBLite consensus disorder prediction 184 204 - -
Phac5g02251 404 SMART serkin_6 36 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02251 404 PANTHER FLIPPASE KINASE 1-RELATED 28 357 - -
Phac5g02251 404 SUPERFAMILY Protein kinase-like (PK-like) 18 386 IPR011009 -
Phac5g02251 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Phac5g02251 404 ProSitePatterns Protein kinases ATP-binding region signature. 42 63 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02251 Phac-Chr5 41596379 41597898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02251 29 404 AGC Kinase Gene Family AT3G20830 58.911 1.69e-148 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Phac5g02251 Pkinase 3.8e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02251 - - gmx:100802613 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02251 5 41596379 41597898 Phac5g02251 5 41596379 41597898 ECH