Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02247 ATGACTCACCCCTACTGCTCCAATGACTTCAATGCCTGGTTTGACCTCAATTCTCCATTCATTTTCTCCTCTTCTTCATCACCTTGCTCCAACAACCCTCCATTCTACTTTCCTTCTACTTATCATCATCACAACTTCACAAGTGGCATCTCTTTTACTCCCCATCAATCCTCTCCCCCCAAAGAAGCACTTCCTCTCCTTAACCTAAGCCCTGCAAGAGGTGAAGATCTTGAATCTTGCTTTAGTGTCATGAATGTCAACAAAGAGAAGGAGAGAGAACTAAGCATGTTGTCTAGTAATAATAACTCTTTGGATGATGATGAGACTGTGACGGTGGCTTTGCACTTAGGGCTTCCAAGCACTACCACTTCCTCTGATTTAACCTCAAACACATACTCAGACAAAGAAAAAGCCACTGTTGCTTCTGAGTATTCTCCTACCAGAATTAACAAGGGTCAGTATTGGATCCCTACCCCTACTCAAATTCTCATCGGTCCAACACAGTTCTCATGCCCCCTTTGTTTCAAGACCTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCTCAATACAGAAAGGGACCAGAGTCCCTAAGGGGAACTCAACCAACAGCAATGCTTAGACTCCCTTGCTATTGTTGTGCAGCTGGATGCAAGAACAACATTGACCATCCAAGAGCAAAGCCACTCAAAGACTTCAGAACCCTCCAAACTCATTACAAGAGAAAGCATGGAATCAAACCCTTCATGTGTAGAAAATGTTGCAAAGCATTTGCTGTGAGGGGTGATTGGAGGACCCATGAGAAGAACTGTGGGAAGCTATGGTATTGCTCTTGTGGCTCCGATTTCAAGCACAAAAGATCTCTTAAAGATCATATCAAGGCATTTGGGAATGGACATAAAGCTTATGGAATCGACTGTCTTGATCAAGATGATGAACCTGGCTCTGAAATTGAGCAAGAAAGTGTTAATGAATCTTTAGTTTCAAGTCATAGTTGA 1011 0.4293 MTHPYCSNDFNAWFDLNSPFIFSSSSSPCSNNPPFYFPSTYHHHNFTSGISFTPHQSSPPKEALPLLNLSPARGEDLESCFSVMNVNKEKERELSMLSSNNNSLDDDETVTVALHLGLPSTTTSSDLTSNTYSDKEKATVASEYSPTRINKGQYWIPTPTQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAAGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKAYGIDCLDQDDEPGSEIEQESVNESLVSSHS* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02247 336 Coils Coil 87 107 - -
Phac5g02247 336 SUPERFAMILY beta-beta-alpha zinc fingers 235 273 IPR036236 -
Phac5g02247 336 ProSiteProfiles Zinc finger C2H2 type domain profile. 169 196 IPR013087 -
Phac5g02247 336 PANTHER ZINC FINGER PROTEIN WIP2 30 326 IPR043584 GO:0003700|GO:0010468
Phac5g02247 336 FunFam Zinc finger protein WIP2 222 304 - -
Phac5g02247 336 Gene3D Classic Zinc Finger 168 191 - -
Phac5g02247 336 MobiDBLite consensus disorder prediction 316 336 - -
Phac5g02247 336 Gene3D Classic Zinc Finger 229 310 - -
Phac5g02247 336 ProSitePatterns Zinc finger C2H2 type domain signature. 171 191 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02247 Phac-Chr5 41582155 41584846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02247 61 333 C2H2 Transcription Factor Family AT3G57670 60.759 1.65e-128 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac5g02247 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02247 - - gmx:100801922 576.244