Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02241 ATGGAGGTCCGTTACAATAACATCTGCTATCCCTACAGTACAGCAGGAAGCTTTATTGAATATGTTGAAGGTCTTACATACGAACATGTTAACTTCATTTTTTCTGGCGCTTCACTTACTCAGGAGAGTTTATACCCTTCAAGTTCAACTACAAACTTTTACAAATCTGGGCTATCTGAACCAGGTAGTACCTCGTACTATCAGGATAGTAATGGTTACGAGGTGAATTATTATGAACAATTGATGGATCAGTATAGAAGGCACTCGGAAAACTCTGCAACAATCAATGAACAGATCACAACAGTATGTATAGAAAGGGAAGAAGGAGTAAACAATGTCACACTAGACAGTTCTATTGAATGTCCACGAAGGCATCATAATGATTTCAATGATTATGAGGTCAGTTGGGAAGACAATATTGATCCTGACAACATGACCTATGAGGTTGAACTGAAAGAACTACTTGAATTAGGTGAGACAGTTGGAACTGAGAGTCGTGGTCTCTCCCAAGAACAAATCTCATTGATTCCAGTATCAAAGTACAAGTGTGGCCGCTTCTTTTTCTTTAGGAAGAAGTCACGGGAGGAGAGATGCGTTATTTGTCAGATGGAATATAGAAGAGGGGACAAGAGGATGACTTTACCATGCAAACATGCCTATCATGCTAGCTGTGGGAACAAATGGCTTAGCATCAATAAGGCTTGCCCGATGTGTTACAGGGAGGTGATTGTGGACGTGTCAAAACACAAATAA 753 0.4011 MEVRYNNICYPYSTAGSFIEYVEGLTYEHVNFIFSGASLTQESLYPSSSTTNFYKSGLSEPGSTSYYQDSNGYEVNYYEQLMDQYRRHSENSATINEQITTVCIEREEGVNNVTLDSSIECPRRHHNDFNDYEVSWEDNIDPDNMTYEVELKELLELGETVGTESRGLSQEQISLIPVSKYKCGRFFFFRKKSREERCVICQMEYRRGDKRMTLPCKHAYHASCGNKWLSINKACPMCYREVIVDVSKHK* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02241 250 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 243 IPR033276 GO:0004842|GO:0016567|GO:0046621
Phac5g02241 250 ProSiteProfiles Zinc finger RING-type profile. 198 238 IPR001841 -
Phac5g02241 250 Coils Coil 78 98 - -
Phac5g02241 250 Pfam Ring finger domain 197 238 IPR001841 -
Phac5g02241 250 FunFam E3 ubiquitin ligase BIG BROTHER 158 243 - -
Phac5g02241 250 SMART ring_2 198 238 IPR001841 -
Phac5g02241 250 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 158 243 IPR013083 -
Phac5g02241 250 SUPERFAMILY RING/U-box 195 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02241 Phac-Chr5 41547559 41551114 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02241 2 249 C3H Transcription Factor Family AT3G63530 38.554 1.06e-51 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02241 K19045 - gmx:100793907 367.466