Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02214 ATGAGAGAACAAAGCTTTGGAGATAAGATGCATGGAATGACAACAACTCTCCCTCTCACTGCGAACACCTTTCTTTGTTTTGCCAACACTCACCTTTCTCTCAGATCTCTTCCATCAACTTTTTGCATACCCACTTCTACAATTAGCTATGCAAGTCGGTTTCACCATTCACAGTGGAAGCACCAGAAGAAAGAAAGATGGGGCAAAAGCATGATGGTGGTGAGAGCAAGGCGTGGCGAGTCTCCGTACGAAGTTCTGGGTGTCTCTCCATCCGCAACTGTCCACGAAATCAAAAGGGCGTATCGGAAACTAGCTCTTAAGTATCATCCTGATGTCAATAAAGAGGAGAAGGCACAGGAGAAATTTATGAGGATAAAACATGCATACAATACATTGCTAAATTCCAGTTCTCGCAAAAGATATGATTCTGGAAGTCGAGGTTATGATTTTTCTCAAGGAAGCCAAACTAGGAATGCACAACCTGAAGAAGAATTTTATGGACTAGGTAATTTTTTGAGGGATGTTCAAATAACAATAGAGGACTTTTTTAAGGATCTTCAAGAAGAATTCAGGAATTGGGAAGCAAACGCTGCTTCACAAGGAAAACCAAAGAGTCTATGGGAGGAATTGGCGGAAATAGGAGAAGAATTTGTGGAGTTCCTTGAGAAAGAACTCAATATTACAGATAAAAATGATGACTACAAGACACCTTATGATGCATCCAACTTTTCTGGGAGGGAGACACCAAGCAATAGTAGTAGTCCAGGTGAAGCCAGCAAGGGATACAAAAGTGTTGAGGATAACCTCGATGAAATAGAAGCCACTCTGAATCAGTTGAAAAAGGAATTAGGTTTGTAG 858 0.4103 MREQSFGDKMHGMTTTLPLTANTFLCFANTHLSLRSLPSTFCIPTSTISYASRFHHSQWKHQKKERWGKSMMVVRARRGESPYEVLGVSPSATVHEIKRAYRKLALKYHPDVNKEEKAQEKFMRIKHAYNTLLNSSSRKRYDSGSRGYDFSQGSQTRNAQPEEEFYGLGNFLRDVQITIEDFFKDLQEEFRNWEANAASQGKPKSLWEELAEIGEEFVEFLEKELNITDKNDDYKTPYDASNFSGRETPSNSSSPGEASKGYKSVEDNLDEIEATLNQLKKELGL* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02214 285 Coils Coil 262 282 - -
Phac5g02214 285 MobiDBLite consensus disorder prediction 139 161 - -
Phac5g02214 285 SUPERFAMILY Chaperone J-domain 53 141 IPR036869 -
Phac5g02214 285 ProSiteProfiles dnaJ domain profile. 81 145 IPR001623 -
Phac5g02214 285 CDD DnaJ 82 134 IPR001623 -
Phac5g02214 285 MobiDBLite consensus disorder prediction 231 266 - -
Phac5g02214 285 ProSitePatterns Nt-dnaJ domain signature. 122 141 IPR018253 -
Phac5g02214 285 MobiDBLite consensus disorder prediction 237 259 - -
Phac5g02214 285 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 38 233 - -
Phac5g02214 285 PRINTS DnaJ domain signature 117 137 IPR001623 -
Phac5g02214 285 PRINTS DnaJ domain signature 83 101 IPR001623 -
Phac5g02214 285 PRINTS DnaJ domain signature 101 116 IPR001623 -
Phac5g02214 285 Pfam DnaJ domain 82 142 IPR001623 -
Phac5g02214 285 Gene3D DnaJ domain 79 199 IPR036869 -
Phac5g02214 285 SMART dnaj_3 80 137 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02214 Phac-Chr5 41407515 41411169 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02214 83 143 C2H2 Transcription Factor Family AT1G74250 40.299 4.78e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02214 - - gmx:100812972 431.024