Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02213 ATGAGAGAACAAAGCTTTGGAGATAAGATGCATGGAATGACAACAACTCTCCCTCTCACTGCGAACACCTTTCTTTGTTTTGCCAACACTCACCTTTCTCTCAGATCTCTTCCATCAACTTTTTGCATACCCACTTCTACAATTAGCTATGCAAGTCGGTTTCACCATTCACAGTGGAAGCACCAGAAGAAAGAAAGATGGGGCAAAAGCATGATGGTGGTGAGAGCAAGGCGTGGCGAGTCTCCGTACGAAGTTCTGGGTGTCTCTCCATCCGCAACTGTCCACGAAATCAAAAGGGCGTATCGGAAACTAGCTCTTAAGTATCATCCTGATGTCAATAAAGAGGAGAAGGCACAGGAGAAATTTATGAGGATAAAACATGCATACAATACATTGCTAAATTCCAGTTCTCGCAAAAGATATGATTCTGGAAGTCGAGGTTATGATTTTTCTCAAGGAAGCCAAACTAGGAATGCACAACCTGAAGAAGAATTTTATGGACTAGAGGACTTTTTTAAGGATCTTCAAGAAGAATTCAGGAATTGGGAAGCAAACGCTGCTTCACAAGGAAAACCAAAGAGTCTATGGGAGGAATTGGCGGAAATAGGAGAAGAATTTGTGGAGTTCCTTGAGAAAGAACTCAATATTACAGATAAAAATGATGACTACAAGACACCTTATGATGCATCCAACTTTTCTGGGAGGGAGACACCAAGCAATAGTAGTAGTCCAGGTGAAGCCAGCAAGGGATACAAAAGTGTTGAGGATAACCTCGATGAAATAGAAGCCACTCTGAATCAGTTGAAAAAGGAATTAGGTTTGTAG 825 0.4158 MREQSFGDKMHGMTTTLPLTANTFLCFANTHLSLRSLPSTFCIPTSTISYASRFHHSQWKHQKKERWGKSMMVVRARRGESPYEVLGVSPSATVHEIKRAYRKLALKYHPDVNKEEKAQEKFMRIKHAYNTLLNSSSRKRYDSGSRGYDFSQGSQTRNAQPEEEFYGLEDFFKDLQEEFRNWEANAASQGKPKSLWEELAEIGEEFVEFLEKELNITDKNDDYKTPYDASNFSGRETPSNSSSPGEASKGYKSVEDNLDEIEATLNQLKKELGL* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02213 274 MobiDBLite consensus disorder prediction 220 255 - -
Phac5g02213 274 ProSiteProfiles dnaJ domain profile. 81 145 IPR001623 -
Phac5g02213 274 Coils Coil 251 271 - -
Phac5g02213 274 CDD DnaJ 82 134 IPR001623 -
Phac5g02213 274 MobiDBLite consensus disorder prediction 226 248 - -
Phac5g02213 274 ProSitePatterns Nt-dnaJ domain signature. 122 141 IPR018253 -
Phac5g02213 274 PRINTS DnaJ domain signature 117 137 IPR001623 -
Phac5g02213 274 PRINTS DnaJ domain signature 101 116 IPR001623 -
Phac5g02213 274 PRINTS DnaJ domain signature 83 101 IPR001623 -
Phac5g02213 274 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 38 222 - -
Phac5g02213 274 Gene3D DnaJ domain 79 188 IPR036869 -
Phac5g02213 274 Pfam DnaJ domain 82 142 IPR001623 -
Phac5g02213 274 SUPERFAMILY Chaperone J-domain 53 141 IPR036869 -
Phac5g02213 274 FunFam Chaperone DnaJ-domain superfamily protein 78 188 - -
Phac5g02213 274 SMART dnaj_3 80 137 IPR001623 -
Phac5g02213 274 MobiDBLite consensus disorder prediction 139 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02213 Phac-Chr5 41407515 41411169 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02213 83 143 C2H2 Transcription Factor Family AT1G74250 40.299 4.38e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02213 - - gmx:100793601 420.624