Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02211 ATGAGAGAACAAAGCTTTGGAGATAAGATGCATGGAATGACAACAACTCTCCCTCTCACTGCGAACACCTTTCTTTGTTTTGCCAACACTCACCTTTCTCTCAGATCTCTTCCATCAACTTTTTGCATACCCACTTCTACAATTAGCTATGCAAGTCGGTTTCACCATTCACAGTGGAAGCACCAGAAGAAAGAAAGATGGGGCAAAAGCATGATGGTGGTGAGAGCAAGGCGTGGCGAGTCTCCGTACGAAGTTCTGGGTGTCTCTCCATCCGCAACTGTCCACGAAATCAAAAGGGCGTATCGGAAACTAGCTCTTAAGTATCATCCTGATGTCAATAAAGAGGAGAAGGCACAGGAGAAATTTATGAGGATAAAACATGCATACAATACATTGCTAAATTCCAGTTCTCGCAAAAGATATGATTCTGGAAGTCGAGGTTATGATTTTTCTCAAGGAAGCCAAACTAGGAATGCACAACCTGAAGAAGAATTTTATGGACTAGGTAATTTTTTGAGGGATGTTCAAATAACAATAGGTAGATATATACTCTCTGGTAGACATCATGGATCATGTTGA 579 0.4128 MREQSFGDKMHGMTTTLPLTANTFLCFANTHLSLRSLPSTFCIPTSTISYASRFHHSQWKHQKKERWGKSMMVVRARRGESPYEVLGVSPSATVHEIKRAYRKLALKYHPDVNKEEKAQEKFMRIKHAYNTLLNSSSRKRYDSGSRGYDFSQGSQTRNAQPEEEFYGLGNFLRDVQITIGRYILSGRHHGSC* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02211 192 Pfam DnaJ domain 82 142 IPR001623 -
Phac5g02211 192 SUPERFAMILY Chaperone J-domain 53 141 IPR036869 -
Phac5g02211 192 ProSiteProfiles dnaJ domain profile. 81 145 IPR001623 -
Phac5g02211 192 MobiDBLite consensus disorder prediction 139 159 - -
Phac5g02211 192 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 37 155 - -
Phac5g02211 192 PRINTS DnaJ domain signature 101 116 IPR001623 -
Phac5g02211 192 PRINTS DnaJ domain signature 117 137 IPR001623 -
Phac5g02211 192 PRINTS DnaJ domain signature 83 101 IPR001623 -
Phac5g02211 192 CDD DnaJ 82 134 IPR001623 -
Phac5g02211 192 Gene3D DnaJ domain 79 180 IPR036869 -
Phac5g02211 192 ProSitePatterns Nt-dnaJ domain signature. 122 141 IPR018253 -
Phac5g02211 192 SMART dnaj_3 80 137 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02211 Phac-Chr5 41407515 41411169 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02211 83 143 C2H2 Transcription Factor Family AT1G74250 40.299 1.39e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02211 - - pvu:PHAVU_005G146300g 388.652