Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02200 ATGCTTTCCACCAATTCTCTCCTGCAAAATTTTGGAGGTTCTATCTCGGTGTTTTCAGATCAGAACCAAGTGGCGGAGGGGATTGAGTTTGATGATTCATCTTCTCCTTCTTCTGGTACAAGCTCAAGTGGAGAATCGACCAAGTATTCCAACAACATCCTTAGATACATAAGCGACATCCTCATGGATGAGGAAGACGACCTGGAGAGCAAACCCTGCATGTTGCAGGAATGTTTGAGACTCCAGGCTGCTGAAAAATCCTTCCTTGATGTCCTTGTCCATCACAGTTCTTCTTTCAGTGGTGAAATCGTAGACCCTGATGAAAATTTTGGTCGCACTGCTAGTTTTGAGAGCAATGGCAGCTGCACTACTGATAATTCATGTGACTCTGACTTGGTCAACGGTGTAGGTGAATTTGACTCTTCTTTTCTACTACAGCAAGCCCACCTAGTTTATTCCCCAGATGTAGTTGATGCATTTAGGGTTCGTGATGGAACCTGGAATCTCGTTCAATCTCATACAAAGCCGGTGATGGTGGAAGAGGGTTGTTCAGGTTCAGCATCCAGAGAGAAGAGAAGCCATCAGAATGATGATGGTTTTCATGAACAAGATGGAAGAAGAGGCAGCAAGGTTTCAGCTGTGTTTTCTGATGAGTTAGAGCCGCCAGAGATCTTAGATGAGGTGTTGCTTTGTCAAATTGGAAGAAGTGGATCTGGTTCTGAACCATCACAAGGTGTTGACTTAAGAGGGTCCAATGGAAAGGCAACACGCTCACGTCCAAAGAAAGGGTCCACCAAATCAGGTACAGCAGCTGTAGATTTATGGACCCTTCTAACTCAATGTGCACAGGCAGTGGCAAGCTTTGACCAAAGGAATGCAAATGAGTTACTCTGCCAGATTAGGCAACACTCTTCACCTTATGGGGATGGACTCCAGCGTTTGGCTCATTACTTTGCCAATGGCCTTCAGATAAGGTTGGCTGCTGGGACGCCATCATATGTGCCACTGGAAGTGGCAACTGCTGCTGATATGTTGAAAGCTTACAAACTATTTGTTACATCCTCTCCTTTGCAAAGGATGTCAAATTATTTGGCAACCAAGACCATCATTAGTCTTGTGAAAAATGAGAGCAGCGTTCATATTATTGACTTTGGCATTTGCTATGGTTTTCAGTGGCCCTGCCTCATCAAAAGGCTCTCAGAAAGACAGGGTGGTCCTCCAAGGCTTCGTATAACAGGAATTGATCTTCCTCGGCCAGGATTTCGGCCTGCTGAAAGGGTTGAGGAGACAGGGCGGCGTTTGGAAAACTACTGCAAGAAGTTCAATGTCCCTTTTGAGTACAATTGCCTTGCACAGAAATGGGAAACTATAAAACTTGCAGATCTCAAGCTAGACACGAATGAAGTGACTGTTGTTAGCTGTTTCAACCGGCTGAAGAACCTGCCTGATGAAACTGTGGCAGTGAACTGTCCAAGAGATGCTGTGTTGAAGTTGATTAGGAAGATCAATCCAAACATCTTCATCCATGGGGTGGTCAATGGCTCTTATAGTGCACCTTTTTTCCTGACACGGTTCAGGGAAGCACTGTACCACTTCTCATCACTGTTTGATATGTTTGAGGTTAATGTACCTCGTGAAGACTCTCAAAGAGTGATGTTTGAGAAAGCGTTGCTTGGAAGAGATGCCATGAATGTTATAGCGTGTGAGGGGGCTGAGAGAGTTGAGAGACCGGAGACCTACAAGCAGTGGCAGGTTAGGAACCTGAGAGCTGGGTTCAAACAAGTTCCTTTGGATCCTGAGTTGGTGAATTATGCCAAACAAATGGTGAAGAAGGAATATCACAAAGATTTTGTGGTGGCTGAGGATGGCAAGTGGATTTTGCAGGGATGGAAAGGGCGAATTCTGAATGCCATTTCTGCATGGGCTCCTGCTTGA 1935 0.4527 MLSTNSLLQNFGGSISVFSDQNQVAEGIEFDDSSSPSSGTSSSGESTKYSNNILRYISDILMDEEDDLESKPCMLQECLRLQAAEKSFLDVLVHHSSSFSGEIVDPDENFGRTASFESNGSCTTDNSCDSDLVNGVGEFDSSFLLQQAHLVYSPDVVDAFRVRDGTWNLVQSHTKPVMVEEGCSGSASREKRSHQNDDGFHEQDGRRGSKVSAVFSDELEPPEILDEVLLCQIGRSGSGSEPSQGVDLRGSNGKATRSRPKKGSTKSGTAAVDLWTLLTQCAQAVASFDQRNANELLCQIRQHSSPYGDGLQRLAHYFANGLQIRLAAGTPSYVPLEVATAADMLKAYKLFVTSSPLQRMSNYLATKTIISLVKNESSVHIIDFGICYGFQWPCLIKRLSERQGGPPRLRITGIDLPRPGFRPAERVEETGRRLENYCKKFNVPFEYNCLAQKWETIKLADLKLDTNEVTVVSCFNRLKNLPDETVAVNCPRDAVLKLIRKINPNIFIHGVVNGSYSAPFFLTRFREALYHFSSLFDMFEVNVPREDSQRVMFEKALLGRDAMNVIACEGAERVERPETYKQWQVRNLRAGFKQVPLDPELVNYAKQMVKKEYHKDFVVAEDGKWILQGWKGRILNAISAWAPA* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02200 644 MobiDBLite consensus disorder prediction 236 251 - -
Phac5g02200 644 MobiDBLite consensus disorder prediction 236 267 - -
Phac5g02200 644 MobiDBLite consensus disorder prediction 178 208 - -
Phac5g02200 644 ProSiteProfiles GRAS family profile. 265 642 IPR005202 -
Phac5g02200 644 MobiDBLite consensus disorder prediction 185 208 - -
Phac5g02200 644 Pfam GRAS domain family 276 641 IPR005202 -
Phac5g02200 644 MobiDBLite consensus disorder prediction 28 47 - -
Phac5g02200 644 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 209 635 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02200 Phac-Chr5 41325995 41328212 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02200 49 643 GRAS Transcription Factor Family AT2G29060 44.872 5.68e-170 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac5g02200 GRAS 5.9e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02200 - - aprc:113855970 990.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02200 5 41325995 41328212 Phac5g02200 5 41325995 41328212 ECH
Phac5g02200 5 41325995 41328212 Phac11g00956 11 6182039 6184561 PCT