Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02187 ATGGGTGTTTGTTTGAGCGCCCAAATTAAAGCTGAAAGCCCGTATAATACTGGGTGGAATTCAAAGTACGGGAGTACAGATGGAAATTATCTTGGCAGCACAAACGATAAGGTTTCAGCGAACTCGGTCCCTCAGACTCCTCGGAGTGAGGGTGAGATCTTGCAGTCATCCAATTTGAAGAGCTTTACCTTATCAGAACTTAAGACGGCCACTAGGAATTTCCGTCCAGACAGTGTGTTAGGAGAAGGTGGTTTTGGATCAGTTTTCAAAGGGTGGATTGATGAGAATTCATTGACTGCTACAAAACCAGGAACTGGCATTGTTATTGCTGTGAAAAGACTCAATCAAGATGGCATCCAGGGTCACAGGGAGTGGTTGGCTGAAGTCAACTACCTTGGACAACTTTCTCATCCTCATCTGGTGAGATTGATTGGATTTTGCCTTGAAGATGAACACCGCCTTCTCGTCTATGAATTCATGCCTCGCGGAAGCTTGGAAAACCATTTGTTCAGGAGAGGCTCATATTTTCAGCCACTTTCTTGGAGCCTCCGTTTGAAAGTTGCTCTTGATGCTGCCAGAGGGCTTGCCTTTCTACACAGTGCTGAAACAAAAGTGATATATAGAGATTTTAAGACTTCAAATATTTTGCTGGATTCAAATTACAATGCAAAACTTTCTGATTTTGGGTTGGCAAAGGATGGACCAACGGGTGACAAAAGTCATGTCTCCACCAGGGTAATGGGAACCTATGGATATGCAGCTCCTGAATATCTAGCCACAGGTCATCTCACGGCCAAGAGTGATGTCTATAGTTTTGGAGTTGTCTTGCTGGAAATGTTATCTGGAAAGAGAGCAGTTGACAAGAACAGACCATCTGGACAACACAATTTGGTGGAATGGGGTAAACCATATCTAGCAAACAAACGCAAGATATTTCGTGTGTTAGACACCCGGCTTGAAGGACAATATTCAACGGATGATGCCTATAAGGTAGCCAACCTTGCCTTGCGGTGCCTGTCAATAGATTCCAAGTTCAGGCCAAACATGGATGAAGTGGTTACAACATTGGAGCAGCTGCAGGTTCCTAATGCAAATGGAGGCAATCAAAATCTTTGTCGTGTTCGAAGAAGAAGTGCTGATGTAAGTAGAGGCTATCAAAATCCTTCTGTTAATGGATCTCGAGCTCGTAGAAGAAGTGCTGATGACTTTAGCCGCATGGAGACTCCCTCAACTTATCCCAGGCCCTCTGCCTCCCCTCTCTATAATTAA 1269 0.4429 MGVCLSAQIKAESPYNTGWNSKYGSTDGNYLGSTNDKVSANSVPQTPRSEGEILQSSNLKSFTLSELKTATRNFRPDSVLGEGGFGSVFKGWIDENSLTATKPGTGIVIAVKRLNQDGIQGHREWLAEVNYLGQLSHPHLVRLIGFCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSLRLKVALDAARGLAFLHSAETKVIYRDFKTSNILLDSNYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGKRAVDKNRPSGQHNLVEWGKPYLANKRKIFRVLDTRLEGQYSTDDAYKVANLALRCLSIDSKFRPNMDEVVTTLEQLQVPNANGGNQNLCRVRRRSADVSRGYQNPSVNGSRARRRSADDFSRMETPSTYPRPSASPLYN* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02187 422 SUPERFAMILY Protein kinase-like (PK-like) 48 356 IPR011009 -
Phac5g02187 422 FunFam Probable serine/threonine-protein kinase PBL8 160 375 - -
Phac5g02187 422 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Phac5g02187 422 MobiDBLite consensus disorder prediction 405 422 - -
Phac5g02187 422 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Phac5g02187 422 Gene3D Transferase(Phosphotransferase) domain 1 160 377 - -
Phac5g02187 422 CDD STKc_IRAK 80 359 - -
Phac5g02187 422 PANTHER OS01G0588500 PROTEIN-RELATED 42 360 - -
Phac5g02187 422 MobiDBLite consensus disorder prediction 364 422 - -
Phac5g02187 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Phac5g02187 422 FunFam Serine/threonine-protein kinase BIK1 41 159 - -
Phac5g02187 422 Pfam Protein tyrosine and serine/threonine kinase 78 356 IPR001245 GO:0004672|GO:0006468
Phac5g02187 422 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02187 Phac-Chr5 41225111 41228225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02187 27 356 Glycoside Hydrolase AT3G07070 46.041 4.67e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac5g02187 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02187 - - gmx:100798404 785.023