Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02172 ATGGAGAGTCCCACTTCAGTAGGAAGAGAACCAAGTGGGTCTCTTTCAGTTTCGAGGTGGAGCCCTAAGAAAGAGCAAATAGCAATCTTGGAGAGCTTTTACAAACAGGGAATAAGGACCCCAAATACTGAGCAGATACAAGAGATTACCTCTAGACTCAGCGCTTATGGTCACATCCAAGGAAAAAATGTCTTCTACTGGTTTCAGAATCATAAAGCCCGTCAAAGACAGAAGCAGAAGCAACAAAGCATTGCATATTCCAATAGCTTTCTTCATGCTTCACAACCCATTGGCCAAAATGTTGTCTGTGCCCCATTTTATCCTCAACAGTGTGGAATGAACTTCTATCCTCAACCAGGAAAGATTGTTCCAGCTGGAGGTGTTATTGAGACAGTTGTGCCCTTTGGGATGCTGAAGATGTGTGATGGCCAGCAGAAACAAATGCAACAGAGGGTACAAACGGATTATAACTATAGCATCAGTGACAGCAAAACCTTAACTCTCTTCCCTCTTCATCCAACAGGCATTTTGGAAGAAAAAACTACTAATCAAGTGTCTTCACATGCTTCAGTTAGTTTCAGTTGA 585 0.4239 MESPTSVGREPSGSLSVSRWSPKKEQIAILESFYKQGIRTPNTEQIQEITSRLSAYGHIQGKNVFYWFQNHKARQRQKQKQQSIAYSNSFLHASQPIGQNVVCAPFYPQQCGMNFYPQPGKIVPAGGVIETVVPFGMLKMCDGQQKQMQQRVQTDYNYSISDSKTLTLFPLHPTGILEEKTTNQVSSHASVSFS* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02172 194 CDD homeodomain 19 73 IPR001356 GO:0003677
Phac5g02172 194 Pfam Homeodomain 18 77 IPR001356 GO:0003677
Phac5g02172 194 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 10 189 IPR044555 GO:0003700|GO:0099402
Phac5g02172 194 Gene3D - 18 85 - -
Phac5g02172 194 SMART HOX_1 15 82 IPR001356 GO:0003677
Phac5g02172 194 ProSiteProfiles 'Homeobox' domain profile. 13 78 IPR001356 GO:0003677
Phac5g02172 194 SUPERFAMILY Homeodomain-like 17 86 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02172 Phac-Chr5 41084093 41085080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02172 12 173 Wox Gene Family AT5G59340 41.206 8.07e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phac5g02172 Homeodomain 1.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02172 - - var:108332933 291.197