Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac5g02149 | ATGAAGAGAAGCAGAGAAGAGGGTGAGTTAGAGAACATGGCTAACTGTTTGATGCTGTTGACCAAAGTTGGTGTGAGTGAAACCAACCCAACATCAAAGGGCTGTGGAGAGTTAAGAGACAGTGATGTTGGTGATTTCAAGTGCAAAACTTGCAATAGAAGGTTTTCTTCTTTTCAAGCACTTGGTGGACACAGAGCAAGTCACAAGAAACCAAGGCTTATGATCACAGATCTTTCGTGCCACCATCACACGTTACCTAGTCCAACCACGAAACAGCAACCTAGGATGCACCCGTGTCCCATTTGTGGGCTTGAGTTTGCCATTGGACAAGCCTTGGGAGGGCACATGAGAAAGCATAGAACTGCCATTAATGGTGGTTTGTTGAATCGTAGAGATTCGGATTCTTTGTCCATTCTGAAGAAATCTAAAGATGGTGGAAGGTTGAATTTGTGTTTGGACTTGAACTTGATGCCATTGGAGGATGATGATCTTAAGCTCAACCTAAGAACACCTGTTCTCGATTGCTTCATTTGA | 534 | 0.4363 | MKRSREEGELENMANCLMLLTKVGVSETNPTSKGCGELRDSDVGDFKCKTCNRRFSSFQALGGHRASHKKPRLMITDLSCHHHTLPSPTTKQQPRMHPCPICGLEFAIGQALGGHMRKHRTAINGGLLNRRDSDSLSILKKSKDGGRLNLCLDLNLMPLEDDDLKLNLRTPVLDCFI* | 178 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac5g02149 | 177 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 46 | 73 | IPR013087 | - | |
Phac5g02149 | 177 | SMART | c2h2final6 | 97 | 119 | IPR013087 | - | |
Phac5g02149 | 177 | SMART | c2h2final6 | 46 | 68 | IPR013087 | - | |
Phac5g02149 | 177 | Gene3D | Classic Zinc Finger | 43 | 119 | - | - | |
Phac5g02149 | 177 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 6 | 162 | - | - | |
Phac5g02149 | 177 | Pfam | C2H2-type zinc finger | 46 | 71 | - | - | |
Phac5g02149 | 177 | Pfam | C2H2-type zinc finger | 97 | 121 | - | - | |
Phac5g02149 | 177 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 99 | 119 | IPR013087 | - | |
Phac5g02149 | 177 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 48 | 68 | IPR013087 | - | |
Phac5g02149 | 177 | SUPERFAMILY | beta-beta-alpha zinc fingers | 46 | 119 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac5g02149 | Phac-Chr5 | 40971326 | 40972358 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac5g02149 | 1 | 168 | C2H2 Transcription Factor Family | AT2G28710 | 48.538 | 1.01e-37 | 125 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Phac5g02149 | zf-C2H2_6 | 3.6e-08 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac5g02149 | - | - | vra:106758971 | 276.174 |