Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02142 ATGACACCCCAGGAAGAACGCCTTGTGCTCGAGCTTCACTCAAAATGGGGAAATAGGTGGTCAAGAATTGCTCGCAAGTTACCAGGGCGCACTGACAATGAGATTAAGAATTACTGGAGGACTCTGATGAGGAAAAAGGCTCAGGACAAAAAGAGAGGAGAAGCTTCTTGTAGTGTTCATTCCTCAACATCAGTATCCTCAAAGAAGCATGCAGTGGAACCACATGGTTCAAAGAAGGCTGGAGAAGAGAGCTTTTATGACACTGGAGGTCCTAGTGTGATAGGATCAAGCCAAGATGAAGGTGAAGGTGAGTTCTCTATGGATGATATATGGAAAGATATTGACATGTCAGAAGAGAACAACAGTTTTCTTCATGGGAACAGTGAAGTGGTTTCTCCATCTCCATCATCATGGGAGTATTGTTCTTGTGAGCCTCTGTGGGTGATGGATGAGGAAAGTTTGTTTTGCCCCATGAGTGAACCATATTTTTATGCATTAAGCGGTTAA 507 0.4359 MTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTLMRKKAQDKKRGEASCSVHSSTSVSSKKHAVEPHGSKKAGEESFYDTGGPSVIGSSQDEGEGEFSMDDIWKDIDMSEENNSFLHGNSEVVSPSPSSWEYCSCEPLWVMDEESLFCPMSEPYFYALSG* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02142 168 Gene3D - 2 75 - -
Phac5g02142 168 ProSiteProfiles Myb-like domain profile. 1 43 IPR001005 -
Phac5g02142 168 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 80 IPR044676 GO:0003700|GO:0006355|GO:0043565
Phac5g02142 168 MobiDBLite consensus disorder prediction 46 105 - -
Phac5g02142 168 CDD SANT 1 43 IPR001005 -
Phac5g02142 168 SMART sant 1 45 IPR001005 -
Phac5g02142 168 FunFam MYB transcription factor 1 68 - -
Phac5g02142 168 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 47 IPR017930 -
Phac5g02142 168 Pfam Myb-like DNA-binding domain 2 42 IPR001005 -
Phac5g02142 168 SUPERFAMILY Homeodomain-like 2 48 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02142 Phac-Chr5 40898239 40900322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02142 1 120 MYB Transcription Factor Family AT3G46130 59.524 6.50e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac5g02142 Myb_DNA-binding 4.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02142 K09422 - gmx:100775900 245.743