Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02113 ATGTTTGAACACTCCACCACTGCATCACCTTCTTCTCTCTTCCCTCAACTCACTCACTTCGACACCCTCTCCCAACTCAACAACTTCGACACCAGTTACTGCTATTACAACAACAACAACAACAGTAGTAGTAACTGTAGCAGTGGCTATAGCAGTTATGGTGGGTCTCCCACTTCTGTGGCCACTCCCAACTTTATGCAGAGGAGTGTCAGCAGTAATTCCTTCAACTACAACAACAATGGCACCCACCACCCTCTTTCTGCTCTCTTCGCCGAATTGCTCGACTCCCATGATGCTCCAGTTAGGAGAGTTTGCAGTACCGGGGATCTCCAGGGGATTAATGGAGGTCAACAAAATCACCTCTCGGATAGTCCGTTATCAAGCGAAAGTAGTATGATCATAGAAGGTATGAACAGAGCCTGTAGATATAGCCCAGAGGAGAAGAAGGTGAGAATTGAGAGATACAGAAGCAAGAGGAACCAGAGGAATTTCAACAAGAAAATTAAGTATGCTTGCAGGAAAACATTGGCAGACAGCAGGCCACGCATCAGAGGAAGGTTTGCAAGGAATGATGAAATTGACAAGAACACTTCAATTCAGTGGAGCCAAACTGGTGGAGATGAAGAGGAAGAAGAAGATGAGAATTGGTTCACCATCTTAGATTCCTTAGTTGCTGCAAATTTTGGTCAGGAATCTCAAGGAAGTTGTTCCTCCCATGGTGTATTCTATTAG 732 0.4495 MFEHSTTASPSSLFPQLTHFDTLSQLNNFDTSYCYYNNNNNSSSNCSSGYSSYGGSPTSVATPNFMQRSVSSNSFNYNNNGTHHPLSALFAELLDSHDAPVRRVCSTGDLQGINGGQQNHLSDSPLSSESSMIIEGMNRACRYSPEEKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIDKNTSIQWSQTGGDEEEEEDENWFTILDSLVAANFGQESQGSCSSHGVFY* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02113 243 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 62 218 IPR045281 GO:0009909
Phac5g02113 243 ProSiteProfiles CCT domain profile. 148 190 IPR010402 GO:0005515
Phac5g02113 243 Pfam CCT motif 150 190 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02113 Phac-Chr5 40695839 40698548 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02113 106 195 C2C2-CO-like Transcription Factor Family AT5G15850 34.444 2.21e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac5g02113 CCT 8.7e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02113 - - gmx:102661609 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02113 5 40695839 40698548 Phac5g02113 5 40695839 40698548 ECH
Phac5g02113 5 40695839 40698548 Phac11g01057 11 6935339 6938009 PCT