Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02105 ATGGAGCCGTCAGAAAAGTCGCCGAAAAAAGTATCATCAGTCAGATCACCATTTCCGAGAGATCCACGTGGCTCACTCGAAGTGTTCAACCCAAACACTTCAACTGCAACGAACTCGCGCGTGCGTTCACAGCCGCTTTGGAAATCGTACACGGAGTCGGAGGAATCGCGCGATGAAATCGCCGCCACATCGTGGATGGCGATTAATCCGGCGCCGCAAGCAGAAGTAGAAGGCGGCGCGGCGGCGCAGAGGGCTGCGGAGTGGGGATTGGTGCTCCGAACCGACACCGAGACCGGCAGGCCGCAGGGCGTGGCGGCAAGGAACTCCGGCGGCGAGGAACCCAACGTTGCCAAACTTGCCGCCGCCGCTTCGTCTTCCAGGAAGAACTCTCAGAACTCCGCCAGAACCTCCGGCGACTCCTCCTCTGACGGCGGCGGCGACGTCGTGAGTGGAATTCCGAGAATTTCGGAGGACGTGATGGGGGCTTTGTCGGCTTTCCAACAAACTTTCGTGGTTTCGGATGCTACCAAACCCGATTGCCCGATCCTGTATGCGAGTGCCGGGTTCTTTAAAATGACGGGTTATACGTCCAAGGAAGTTATTGGCAGAAACTGTCGGTTTTTACAGGGTGCGGAGACTGATTCTGGTGATGTGGCAAAGATAAGGGAAGCATTGGAAGCTGGGAAAATTTACTGCGGAAGGCTATTAAATTACAAGAAGGATGGAACACCTTTCTGGAACCTTCTCACGATTTCACCCATTAAGGATGAAGATGGCAAGGTTCTCAAATTTATCGGAATGTTAGTGGAGGTTAGCAAGCACACGGAGGGGTTGAAGGAGAAGACTCTACGTCCCAATGGATTACCGGAATCCTTGATTCGATACGATGCACGCCAGAAAGAGAAGGCTACAAACTCAGTATCTGAGTTGTTGCAGATCATGAAGCGCCCCCGAGCACTGAGTGAATCCGCAGGCCGACCCTCCATTAGAAAATCAGGATTTGCTGAGGAAGAAAAACAATCACTACATGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGGAGGAGAAGAAGAAAGAGAAAGCAAAAAAAACATTAAGAAGAAAATCCGAGAGTGAGGTTTCATTAGGACGCAAATCAGAAGGAGGAAAAAGAATTTCCATGCAACGAATCAGTGAAGTGCCTGAAAATAAACTGAAAAACTCTCAGCGCCGTTCCTTCATGGGGTTCAGGCGGAAAAGTGAGTCCAATGATGAAAGCATGGAAAATGAAGTTTTTGAGGATGTCAGCTCTGATAGTGAGGATGGTGAGAGGCCTGATAGTTTTGATGTAGATGGCAAAGAAAAGCAGAGGGAAAAGAGAAAAGGTCTTGATCTTGCTACCACGCTTGAACGTATTGAGAAAAACTTTGTCATTACTGATCCAAGGCTTCCAGACAATCCAATAATCTTTGCATCGGATAGCTTCTTAGAGCTTACAGAATATAGTCGTGAAGAAATCTTGGGAAGGAATTGCAGGTTTCTACAAGGACCTGAAACTGATCCAGCAACTGTGAGAAAAATTAGAGAAGCAATTGACAACCAAACAGAAGTTACCGTGCAACTGATTAATTATACAAAGAGTGGAAAGAAGTTCTGGAACCTGTTTCATTTGCAACCTATGCGTGATCAGAAGGGAGAAGTGCAGTATTTTATTGGTGTTCAACTAGATGGTAGTCAACATGTAGAGCCTCTTCAGAACTGCATCGCAGAAGATACTGCAAAGGAGGGAGAACAAATGGTCAAACAAACTGCAGAAAATGTTGATGTGGCAGTGAGAGATCTTCCGGATGCTAATATGAAACCAGACGATTTATGGACAAATCATTCAAAAGCAGTTCACCCCAAACCTCATAGGAAGGATAACCCTGCATGGAAAGCTATCCAGAAGGTCCTAGAAAGTGGAGAACAGATAAGCTTAAAGCACTTTAGGCCGATTAAACCTTTAGGATCAGGAGATACTGGCAGTGTGCATCTGGTGGAGCTACGTGGAACAGGTCAATATTTTGCCATGAAGGCTATGGATAAGGGTGTTATGCTCAATCGTAACAAGGTGCATAGAGTTTGCGCAGAGAGAGAAATTCTTGACCAGCTGGACCACCCTTTTCTACCTGCATTATATGCTTCGTTCCAGACCAAATCACACGTTTGTTTGATAACTGATTATTGTCCTGGCGGAGAATTATTCATGCTTCTTGACCAGCAACCAACTAAGGTTCTAAAGGAAGACGCCGCGAGATTTTATGCAGCTGAGGTAGTGATTGCATTGGAGTACCTTCACTGCCAAGGGATAATATATCGAGATTTGAAGCCTGAAAATGTGTTAATCCAGAGCAATGGGCATGTGTCCCTAACAGATTTTGATTTGTCATGTTTAACTTCTAGTAAGCCACAGCTTATAATTCCAGCTTCCAATTCAAAGAAGAAGAAGAAGAAGAAACAGAGAAATCAGGAGGTTCCTGTGTTTATGGCTGAACCAATGAGAGCATCAAATTCTTTTGTTGGCACGGAAGAGTACATAGCTCCGGAAATTATAACTGGTTCTGGTCACACTAGTGCTGTTGATTGGTGGGCGCTAGGTAAGTCTCCAGGGAAAGCAGCTGATTTATTGGTTATTGCAGAGAGATCCCAAAGAAAGATTGGGGTCACGTGA 2691 0.4597 MEPSEKSPKKVSSVRSPFPRDPRGSLEVFNPNTSTATNSRVRSQPLWKSYTESEESRDEIAATSWMAINPAPQAEVEGGAAAQRAAEWGLVLRTDTETGRPQGVAARNSGGEEPNVAKLAAAASSSRKNSQNSARTSGDSSSDGGGDVVSGIPRISEDVMGALSAFQQTFVVSDATKPDCPILYASAGFFKMTGYTSKEVIGRNCRFLQGAETDSGDVAKIREALEAGKIYCGRLLNYKKDGTPFWNLLTISPIKDEDGKVLKFIGMLVEVSKHTEGLKEKTLRPNGLPESLIRYDARQKEKATNSVSELLQIMKRPRALSESAGRPSIRKSGFAEEEKQSLHEEEEEEEEEEEEEKKKEKAKKTLRRKSESEVSLGRKSEGGKRISMQRISEVPENKLKNSQRRSFMGFRRKSESNDESMENEVFEDVSSDSEDGERPDSFDVDGKEKQREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLQNCIAEDTAKEGEQMVKQTAENVDVAVRDLPDANMKPDDLWTNHSKAVHPKPHRKDNPAWKAIQKVLESGEQISLKHFRPIKPLGSGDTGSVHLVELRGTGQYFAMKAMDKGVMLNRNKVHRVCAEREILDQLDHPFLPALYASFQTKSHVCLITDYCPGGELFMLLDQQPTKVLKEDAARFYAAEVVIALEYLHCQGIIYRDLKPENVLIQSNGHVSLTDFDLSCLTSSKPQLIIPASNSKKKKKKKQRNQEVPVFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGKSPGKAADLLVIAERSQRKIGVT* 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02105 896 ProSitePatterns Protein kinases ATP-binding region signature. 662 685 IPR017441 GO:0005524
Phac5g02105 896 FunFam Serine/threonine-protein kinase OXI1 740 808 - -
Phac5g02105 896 SMART pas_2 157 226 IPR000014 -
Phac5g02105 896 SMART pas_2 457 526 IPR000014 -
Phac5g02105 896 MobiDBLite consensus disorder prediction 122 144 - -
Phac5g02105 896 Gene3D PAS domain 444 608 - -
Phac5g02105 896 CDD PAS 182 271 IPR000014 -
Phac5g02105 896 MobiDBLite consensus disorder prediction 94 151 - -
Phac5g02105 896 Pfam Protein kinase domain 658 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02105 896 MobiDBLite consensus disorder prediction 435 456 - -
Phac5g02105 896 CDD PAS 470 570 IPR000014 -
Phac5g02105 896 MobiDBLite consensus disorder prediction 620 634 - -
Phac5g02105 896 MobiDBLite consensus disorder prediction 318 456 - -
Phac5g02105 896 MobiDBLite consensus disorder prediction 1 56 - -
Phac5g02105 896 FunFam Putative LOV domain-containing protein 169 325 - -
Phac5g02105 896 MobiDBLite consensus disorder prediction 341 355 - -
Phac5g02105 896 SUPERFAMILY PYP-like sensor domain (PAS domain) 176 268 IPR035965 -
Phac5g02105 896 ProSiteProfiles PAC domain profile. 529 583 IPR000700 -
Phac5g02105 896 Coils Coil 332 372 - -
Phac5g02105 896 Gene3D Phosphorylase Kinase; domain 1 650 742 - -
Phac5g02105 896 SMART serkin_6 656 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02105 896 MobiDBLite consensus disorder prediction 356 386 - -
Phac5g02105 896 SUPERFAMILY PYP-like sensor domain (PAS domain) 471 570 IPR035965 -
Phac5g02105 896 ProSiteProfiles Protein kinase domain profile. 656 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02105 896 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Phac5g02105 896 NCBIfam PAS domain S-box protein 182 275 IPR000014 -
Phac5g02105 896 NCBIfam PAS domain S-box protein 480 570 IPR000014 -
Phac5g02105 896 MobiDBLite consensus disorder prediction 27 50 - -
Phac5g02105 896 ProSiteProfiles PAC domain profile. 229 283 IPR000700 -
Phac5g02105 896 ProSiteProfiles PAS repeat profile. 455 528 IPR000014 -
Phac5g02105 896 Gene3D PAS domain 169 326 - -
Phac5g02105 896 SMART pac_2 532 574 IPR001610 -
Phac5g02105 896 SMART pac_2 232 274 IPR001610 -
Phac5g02105 896 FunFam LOV domain-containing protein 655 739 - -
Phac5g02105 896 FunFam LOV domain-containing protein 444 608 - -
Phac5g02105 896 MobiDBLite consensus disorder prediction 614 634 - -
Phac5g02105 896 Gene3D Transferase(Phosphotransferase) domain 1 743 875 - -
Phac5g02105 896 ProSiteProfiles PAS repeat profile. 155 204 IPR000014 -
Phac5g02105 896 Pfam PAS domain 478 570 IPR000014 -
Phac5g02105 896 Pfam PAS domain 176 272 IPR000014 -
Phac5g02105 896 SUPERFAMILY Protein kinase-like (PK-like) 637 873 IPR011009 -
Phac5g02105 896 PANTHER PROTEIN TWIN LOV 1 324 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02105 Phac-Chr5 40643069 40654867 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02105 1 873 AGC Kinase Gene Family AT3G45780 68.122 0.0 1164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Phac5g02105 Pkinase 3.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02105 K20715 - gmx:100817565 1455.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02105 5 40643069 40654867 Phac5g02105 5 40643069 40654867 ECH
Phac5g02105 5 40643069 40654867 Phac11g01333 11 9952333 9955679 PCT