Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02101 ATGGACGCAAAGAATTTGAATTTAAAAGAGATTTCTGATGAAGGAAAAGTTAAAAGTTATCGGGCACAAACATTTACTTTTGATGAGCTTGCAACTGCAACAAGGAATTTTATGTCAGAATGCTTTCTGGGTGAAGGAGGGTTTGGCAAGGTTTATAAGGGGTTCATAGAGAAAATAAATCAGGTTGTGGCAATAAAGCAACTAGACCTTTATGGGCATCAAGGAATCAGGGAATTTGTTGTTGAAGTATTGACCTTGAGTTTGGCAGATCACCCTAATTTGGTCACATTGATTGGGTTTTGTGCTGAGGGAGAGGAAAGGCTATTGGTTTATGAGTACATGCCATTAGGATCTTTGGAGAACCATTTGCAGGATCTTCCACATAGTAGAAAACCACTTGATTGGAATACAAGAATGAAAATTGCAGCTGGTGCAGCTAGAGGTTTAGAGTATTTGCATGATATAATGAAGCCTCCAGTCATATACCGTGACTTGAAGTGCTCGAATATTTTATTAGGTGAGGGTTATCATCCCAAGTTATCTGATTTTGGCTTGGCAAAAGTAGGACCATGTGGTGATCAGACCCACGTATCAACAAGAGTTATGGGGACATATGGGTATTGTGCCCCAGATTATGCAATGACGGGTCAATTGACCTTCAAGTCTGACATTTATAGCTTTGGAGTTGTTCTTTTGGAGATCATCACAGGTAGGAAGGCCATTGACCACATGAAACCTGCTAAAGAACAAAATCTAGTTGCATGGGCAAGACCTTTGTTCAAAAACAGAAGAAGATTCTCGGAGATGGTTGATCCATTGCTTGAAGGTCACTATCCAGTAAGAGGTTTGTACCAAGTTCTTGCCATTGCTGCCATGTGTGTTCAAGAACAACCTAGTATGCGGCCTGTCATAGCTGATGTGGTCACAGCTCTAAATTACCTTGAATCCCAGAAGTACGATCCCCAACTTCATTCAGTTCAAAGCTCTAAAGGTTTCTCTTCAAGAGCAAGAACCAGTGATCATAGACTAACTGTTAGCTATGGTTCTGATCCAAGAGGGAGAAAAGTTGATCATACACTACTTGGTAGTAGTGGCAATAGTAGTGGTTCTGAGACAGAAAGCTATATAGAAGTTCTATCTTCTCCAAGACTGCGAAGTGATGGTCATAAACATTTCTATAGTAATGACAGTTCTTGA 1197 0.4027 MDAKNLNLKEISDEGKVKSYRAQTFTFDELATATRNFMSECFLGEGGFGKVYKGFIEKINQVVAIKQLDLYGHQGIREFVVEVLTLSLADHPNLVTLIGFCAEGEERLLVYEYMPLGSLENHLQDLPHSRKPLDWNTRMKIAAGAARGLEYLHDIMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPCGDQTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLEIITGRKAIDHMKPAKEQNLVAWARPLFKNRRRFSEMVDPLLEGHYPVRGLYQVLAIAAMCVQEQPSMRPVIADVVTALNYLESQKYDPQLHSVQSSKGFSSRARTSDHRLTVSYGSDPRGRKVDHTLLGSSGNSSGSETESYIEVLSSPRLRSDGHKHFYSNDSS* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02101 398 SUPERFAMILY Protein kinase-like (PK-like) 23 329 IPR011009 -
Phac5g02101 398 CDD STKc_IRAK 43 312 - -
Phac5g02101 398 SMART serkin_6 37 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02101 398 PANTHER OS07G0668900 PROTEIN 16 323 - -
Phac5g02101 398 Pfam Protein tyrosine and serine/threonine kinase 42 309 IPR001245 GO:0004672|GO:0006468
Phac5g02101 398 MobiDBLite consensus disorder prediction 325 345 - -
Phac5g02101 398 ProSiteProfiles Protein kinase domain profile. 37 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02101 398 FunFam Serine/threonine-protein kinase PBS1 114 329 - -
Phac5g02101 398 Gene3D Transferase(Phosphotransferase) domain 1 114 335 - -
Phac5g02101 398 Gene3D Phosphorylase Kinase; domain 1 8 113 - -
Phac5g02101 398 FunFam probable serine/threonine-protein kinase RLCKVII 9 113 - -
Phac5g02101 398 MobiDBLite consensus disorder prediction 325 375 - -
Phac5g02101 398 MobiDBLite consensus disorder prediction 360 375 - -
Phac5g02101 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Phac5g02101 398 ProSitePatterns Protein kinases ATP-binding region signature. 43 66 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02101 Phac-Chr5 40632370 40635145 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02101 12 314 Glycoside Hydrolase AT3G07070 63.279 4.62e-142 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phac5g02101 PK_Tyr_Ser-Thr 5.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02101 - - gmx:100794680 642.499