Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02081 ATGTTGGATCTTAATCTGAATGCCGACTCGACTCAGAGCCACGACTCGGTGATGCTGTTGGACAAGTTTCCTGAAGCTTCTTCCGGAACTTCGAATTCCTCCGTGGTGAATGCGGAAGGGTCTAGCAACGAGGACTCGTGCTCGACACGCGCCGGTGGCGTGTTCACCTTTAATTTCGGAATTCTTAAGGTCGAAGGCGCGGACGACGTCGTCGTCACCGCGACGAAGGAGCTGTTTCCGGTGAGCGCGGATAATTGGCAAGGGCAGAGTTCGACGTCGTCGTTTCAGGCTAGGAAGAGTTTGATGGATCTCTCGCTGGATCGTCAAAACGGCGAGGTGAAGGTGGTTCAGGTTCAGCAACAACCTCAGGTGAAGAAGAGTAGGAGAGGTCCACGGTCTCGGAGCTCTCAGTACAGAGGAGTCACCTTCTATCGAAGGACGGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAACAAGTCTATTTGGGTGGATTTGACACCGCTCATGCCGCGGCTAGGGCTTATGATCGAGCTGCAATTAAGTTCAGGGGACTTGATGCTGATATCAATTTTAATCTTGTTGATTATGAGGAGGATCTAAAACAGATGAAAAATCTTTCCAAGGAGGAGTTCGTGCACATACTGCGCCGCCACAGTACCGGTTTCTCAAGGGGTAGTTCAAAATACAGGGGAGTGACTCTTCACAAATGTGGCCGGTGGGAAGCTCGAATGGGACAATTCCTTGGAAAAAAGGCTTATGACAAGGCAGCTATCAAGTGCAATGGAAGGGAGGCAGTGACTAACTTCGAGCCAAGTGCATATGAGAGCGAAATGAAACCTGAAGCTATTAATGAAGGTGGCAGTCACGATCTTGATCTCAATCTGGGCATAGCGACTCCAGGACATGGTCCCAAAGAAAATCTGGGCCATCTTCAGTTCCAGCAAGTCCCTTACAGCACGCACCCCGGAAGAATTTCAAGGATGGAGACTAATGTTAATTCAGTTATTGGTGATCCTTCTTTGAAAAGGCACATTGTAACTGAAGAGCGTCCTTCTGAATGGAATACCTCATATTCCACTTTCTTTCCCAATCTGGAAAGAGCAGAGAGAATCGGTATAGATCCTTCAAAAGGAGTCCCCAACTGGGCGTGGCAAACACATAGCCAGGTTTCCGCCACCCCAGTACCACCGTTCTCTACTGCAGCATCATCAGGATTCTCAATTTCAGCTACCTTTCCACCAAATGCCATCTTTCCAACAAAATCATTGAACTCAATTCCGCAGAACCTCTGTTTCACTTCAGCCAGTGCACCAGGTAGCAATGCACCTCAATTCTATTACGAGGTCAAGCCCCTGCAGACACCATCCCAGCCTATCTAG 1383 0.4902 MLDLNLNADSTQSHDSVMLLDKFPEASSGTSNSSVVNAEGSSNEDSCSTRAGGVFTFNFGILKVEGADDVVVTATKELFPVSADNWQGQSSTSSFQARKSLMDLSLDRQNGEVKVVQVQQQPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFNLVDYEEDLKQMKNLSKEEFVHILRRHSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKAYDKAAIKCNGREAVTNFEPSAYESEMKPEAINEGGSHDLDLNLGIATPGHGPKENLGHLQFQQVPYSTHPGRISRMETNVNSVIGDPSLKRHIVTEERPSEWNTSYSTFFPNLERAERIGIDPSKGVPNWAWQTHSQVSATPVPPFSTAASSGFSISATFPPNAIFPTKSLNSIPQNLCFTSASAPGSNAPQFYYEVKPLQTPSQPI* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02081 460 CDD AP2 228 273 IPR001471 GO:0003700|GO:0006355
Phac5g02081 460 Gene3D AP2/ERF domain 228 272 IPR036955 GO:0003700|GO:0006355
Phac5g02081 460 Gene3D AP2/ERF domain 136 195 IPR036955 GO:0003700|GO:0006355
Phac5g02081 460 MobiDBLite consensus disorder prediction 115 138 - -
Phac5g02081 460 SMART rav1_2 229 277 IPR001471 GO:0003700|GO:0006355
Phac5g02081 460 SMART rav1_2 137 199 IPR001471 GO:0003700|GO:0006355
Phac5g02081 460 CDD AP2 137 192 IPR001471 GO:0003700|GO:0006355
Phac5g02081 460 SUPERFAMILY DNA-binding domain 228 272 IPR016177 GO:0003677
Phac5g02081 460 ProSiteProfiles AP2/ERF domain profile. 137 193 IPR001471 GO:0003700|GO:0006355
Phac5g02081 460 FunFam AP2-like ethylene-responsive transcription factor 136 195 - -
Phac5g02081 460 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 91 304 - -
Phac5g02081 460 MobiDBLite consensus disorder prediction 26 47 - -
Phac5g02081 460 SUPERFAMILY DNA-binding domain 136 193 IPR016177 GO:0003677
Phac5g02081 460 Pfam AP2 domain 137 185 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02081 Phac-Chr5 40544139 40549306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02081 1 417 AP2-EREBP Transcription Factor Family AT5G60120 48.366 7.54e-101 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac5g02081 AP2 2.4e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02081 K09284 - gmx:100796271 786.949