Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02074 ATGAAGATTTATTATTTTTATCTTTTATGTTCTTATGTACTGAATCAAATATCTAGCCAGTCAGTGGAGAAGAAACCAAGGCCTAATCCAGAACAAGCTCTGAAATGCCCAAGATGCGACTCCACCAGCACAAAATTTTGCTACTACAACAATTATAGTCTTTCTCAGCCAAGATATTTCTGTAAGTCTTGTAGGAGATATTGGACCAAAGGAGGAACACTCAGGAATGTTCCAGTGGGAGGAGGATGCCGAAAGAAGAGATCACCATCATCATCATCATTAAAGAGGGATCATGATCAGACCTTCACACCCAATCTTAATCCACTCACTACATTTCCTCAGTTGTCTTATGGCTCCAATGACTTTGCTCTAGCATTAGCTAGGCTTCAAAAGCAATCAAGTGGGCAATTGGGTTACAATGACCATGAAATTTCTGCTTTGAGGAACCCCACAGGCTCCTTTTGTGACATTCTTAGCAATTCAGGCATGAATCCCTCCTCAGAAAATCCTTCATTTTTGGATGCAATTCGAACTGGGTTCCTTGAAACACAAAATCATCTTCAGAATTTGTATTACATGTATGGAAATGGGGACATGGGGGAGGTGGATAATGGCAATTCTGGTGGAGTTGGGGTCAGTGGAGAGATGATGCTCCCTTATAATCAAGTGATGAGCAATGCAGCCACTCAATCAATGAGTGAGTTGATGAGGCAAGAACAGTGTGGTGGCAGTGAACAAAGTGAAAGGAAGTTGTTGGGGGGTTCGCCATGGCAGCTTAATGCAGACACAAACATTGGTGAAATTGATTCAGGAAGAGCAATTGCAAGTTGGAACAGTTTCACATCTTCTTGGCATGGACTTCTCCATAGCCCCCTAATGTAG 882 0.4206 MKIYYFYLLCSYVLNQISSQSVEKKPRPNPEQALKCPRCDSTSTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKKRSPSSSSLKRDHDQTFTPNLNPLTTFPQLSYGSNDFALALARLQKQSSGQLGYNDHEISALRNPTGSFCDILSNSGMNPSSENPSFLDAIRTGFLETQNHLQNLYYMYGNGDMGEVDNGNSGGVGVSGEMMLPYNQVMSNAATQSMSELMRQEQCGGSEQSERKLLGGSPWQLNADTNIGEIDSGRAIASWNSFTSSWHGLLHSPLM* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02074 293 ProSiteProfiles Zinc finger Dof-type profile. 34 88 IPR003851 GO:0003677|GO:0006355
Phac5g02074 293 MobiDBLite consensus disorder prediction 79 105 - -
Phac5g02074 293 ProSitePatterns Zinc finger Dof-type signature. 36 72 IPR003851 GO:0003677|GO:0006355
Phac5g02074 293 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 24 198 IPR045174 GO:0003700|GO:0006355
Phac5g02074 293 Pfam Dof domain, zinc finger 32 88 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02074 Phac-Chr5 40458538 40461095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02074 32 293 C2C2-Dof Transcription Factor Family AT2G28510 39.781 6.00e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac5g02074 zf-Dof 8.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02074 - - gmx:778104 449.514