Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02069 ATGGAGAGTGACACAAACACCACCCTTACTTCCTCTCCCACATTCTCTCACTCCTCTAACACCCTTTCTTCTTCTTCCCCTCCACAAGTTGTCATGACCCCTTGTGCTGCATGCAAAATCCTTAGGCGAAGATGTGCTGACAAATGTGTGTTGGCACCTTATTTCCCTCCCACCGAACCAGCCAAGTTCACCACTGCTCACCGTGTCTTCGGTGCCAGCAACATCATCAAGTTCTTACAGGAACTTCCAGAGTCTCAGAGAGCTGATGCAGTGGCGAGCATGGTTTACGAGGCTGGTGCAAGAATAAGAGACCCTGTATATGGATGTGCAGGTGCAATTTGCCAGCTCCAAAAGCAGGTCAATGAACTTCAAGCACAGTTAGCAAAGGCACAAGCTGAGGTTGTAACTATGCAATTACAACAAGCCAATCTCGTGGCTCTAATTTGCATGGAAATGTCACAGACTCCACAGGAATCACCACAACAATCCCTGGACAATTTCATCACAAGTCCTTCCCACAACAGTGGATATCAGAACAATCTTAGTTTCTTTGAGGATAACACCAACCTAAACTCTATGTGGGAGCCTCTTTGGACATGA 600 0.4683 MESDTNTTLTSSPTFSHSSNTLSSSSPPQVVMTPCAACKILRRRCADKCVLAPYFPPTEPAKFTTAHRVFGASNIIKFLQELPESQRADAVASMVYEAGARIRDPVYGCAGAICQLQKQVNELQAQLAKAQAEVVTMQLQQANLVALICMEMSQTPQESPQQSLDNFITSPSHNSGYQNNLSFFEDNTNLNSMWEPLWT* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02069 199 MobiDBLite consensus disorder prediction 1 29 - -
Phac5g02069 199 Pfam Lateral organ boundaries (LOB) domain 34 131 IPR004883 -
Phac5g02069 199 ProSiteProfiles LOB domain profile. 33 134 IPR004883 -
Phac5g02069 199 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 33 162 - -
Phac5g02069 199 Coils Coil 113 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02069 Phac-Chr5 40411524 40413455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02069 30 199 AS2 family AT2G28500 67.742 5.46e-81 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac5g02069 LOB 3.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02069 - - gmx:100819336 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02069 5 40411524 40413455 Phac5g02069 5 40411524 40413455 ECH
Phac5g02069 5 40411524 40413455 Phac11g01100 11 7385020 7386989 PCT