Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02040 ATGTCCGTAATCGACATTCTCTTCCGCGTCGATACCATTTGCCACAAATATGACAAATACGACATCGACAAGCAGCGCCAGCTCAACGCCTATGGCGACGACATATTTGCTCGCCTCTATGCGGCTGTCGAATCCAGCATTCAAACCGCTCTCAATAAATCGGAGGCTGCTGCCGCGGAGACCAACAGGGCCGTTTCAGCTGCTTTGAATGCGGAGGTTCGTCGAACCAAGGGTAGACTCATGGACGAGATTCCTAAACTGCGCAAATTGGTGAATAAGAAGGTTAAAGGTCTCACAAAAGAGGATATGGCCATTCGTCAGGATCTTCTTCTGGCATTGCCCGAGAGAATCCAAGCAATACCAGATGGTATTTCTGGTGCTTCTATTCAAACTGCAGGATGGAATGAGACCTCAACTCAGCCACATATCAAGTTTGACTCATCAGAGGGACAACTTGATGGTGAATATTTCCAACAAAGTGAAGAATCCAGTCAGTTCCGACAAGAGTACGAGATGCGCAGGATGAAACAGGATGAAGGACTTGATATCATATCGGAGGGATTGGATACCTTGAAGGATCTGGCCCGTGATATGAATGAGGAATTGGATCGGCAAGTTCCACTAATGGATGAAATTGACAATAAGGTGGATAAGGCAACAGCTGAAGTGAGAAACACTAACGTGAGGCTGAAGAAAACTCTCAACGAGATAAGGTCTAGTCGAAACTTCATCATTGACATCATTCTACTCTGTGTTCTTCTTGGAATCGTTATGTATTTATACAATGCTCTGAGGTGA 798 0.4536 MSVIDILFRVDTICHKYDKYDIDKQRQLNAYGDDIFARLYAAVESSIQTALNKSEAAAAETNRAVSAALNAEVRRTKGRLMDEIPKLRKLVNKKVKGLTKEDMAIRQDLLLALPERIQAIPDGISGASIQTAGWNETSTQPHIKFDSSEGQLDGEYFQQSEESSQFRQEYEMRRMKQDEGLDIISEGLDTLKDLARDMNEELDRQVPLMDEIDNKVDKATAEVRNTNVRLKKTLNEIRSSRNFIIDIILLCVLLGIVMYLYNALR* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02040 265 Coils Coil 209 236 - -
Phac5g02040 265 CDD SNARE_Qc 176 232 - -
Phac5g02040 265 SUPERFAMILY SNARE fusion complex 164 232 - -
Phac5g02040 265 FunFam Putative syntaxin-71-like 171 232 - -
Phac5g02040 265 ProSitePatterns Syntaxin / epimorphin family signature. 177 216 IPR006012 GO:0005484|GO:0006886|GO:0016020
Phac5g02040 265 PANTHER SYNTAXIN 56 253 IPR045242 -
Phac5g02040 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Phac5g02040 265 SMART tSNARE_6 166 233 IPR000727 -
Phac5g02040 265 Gene3D - 171 232 - -
Phac5g02040 265 Pfam SNARE domain 208 257 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02040 Phac-Chr5 40315021 40318217 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02040 1 265 SNARE and Associated Proteins AT3G09740 64.794 1.05e-130 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02040 K08506 - gmx:100777251 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02040 5 40315021 40318217 Phac5g02040 5 40315021 40318217 ECH