Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02039 ATGAATCTTTTTTGTTTTTGTTGTGAATTTGCAGATAAGTCTTTGTTTGGAGAAGAAGAGTGGTATTTCTTTAGCCCAAGAGACAGAAAGTACCCAAATGGATTGAGGCCAAACAGGGCAGCAGCCTCAGGATACTGGAAGGCAACAGGAACGGACAAGCCAATTCTTTCTTCTAGTGGATCAAAGCGCATAGGAGTGAAGAAAGCTCTGGTGTTTTATTCAGGTCGACCTCCTAAGGGATCTAAGACGGATTGGATCATGAATGAATATAGATTGATTGACACAATCACCAAATCCTCCAGGCTAAAAGGCTCCATGCGGTTGGATGACTGGGTACTATGCCGGGTTCGACATAAAGGCTACTCTTCGAAGATATCATGTGAAAATCAAGAGAATCCTAGTGAGCTAAACCTTTCTGCAAAACTACCGAGGAGTGAAGAATATCCAACAAACATGAACTGTCGGACTGACATGATCACTGATTATCAATACAAAGACTATCAGATCATAGCCTCTATTCTTGTTGGTGCACCTGTATCTCCCACTGAAAACATGCCAAATATGAGCTTTAAGGGCTGCAAAGGCACCAATCTAGTTTCAGTTTTTGAAGATGGTTTCACTAAAGTGAATTCTCAGATGACTTTTCCTTCTTTGGACAGTTACTTCAACCCACTGGCAAGAAAATCTAATGAAGATGAACAGGATGGAAATCTCATTTCTTTTAACAGGAAGTCTGAGAACAAAATGGACGAATCACCTAGCAGGGTGTTGGCCAGTAGAGAGTTGAACTGTTATAACCAAAACCAGTCTCAAGATGACATTTTCAGTGAGAACCTACCTGACACTGGCATCAATTTCCAAGAGCTTAACGATTTAGTCTTTACAGGAAGGTACCCTCAGTGA 903 0.412 MNLFCFCCEFADKSLFGEEEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDKPILSSSGSKRIGVKKALVFYSGRPPKGSKTDWIMNEYRLIDTITKSSRLKGSMRLDDWVLCRVRHKGYSSKISCENQENPSELNLSAKLPRSEEYPTNMNCRTDMITDYQYKDYQIIASILVGAPVSPTENMPNMSFKGCKGTNLVSVFEDGFTKVNSQMTFPSLDSYFNPLARKSNEDEQDGNLISFNRKSENKMDESPSRVLASRELNCYNQNQSQDDIFSENLPDTGINFQELNDLVFTGRYPQ* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02039 300 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 232 - -
Phac5g02039 300 SUPERFAMILY NAC domain 11 119 IPR036093 GO:0003677|GO:0006355
Phac5g02039 300 ProSiteProfiles NAC domain profile. 1 119 IPR003441 GO:0003677|GO:0006355
Phac5g02039 300 Gene3D NAC domain 6 122 IPR036093 GO:0003677|GO:0006355
Phac5g02039 300 Pfam No apical meristem (NAM) protein 12 92 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02039 Phac-Chr5 40311894 40314700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02039 9 130 NAC Transcription Factor Family AT1G69490 66.393 2.96e-53 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac5g02039 NAM 2.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02039 - - vra:106759457 550.436