Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02038 ATGGAGGGAGATCAACTGAGCTCGGGTTACTCTTTTCCACCTGGCTTCAGATTCCACCCTTCTGATGAAGAACTCATAGTTCACTACTTGCAAAACAAAATCAGTTCACGTCCACTTCCAGCATCTATTATAGCTGAAATAGATCTCTACAAGTATAACCCGTGGGAGCTACCCAATAAGTCTTTGTTTGGAGAAGAAGAGTGGTATTTCTTTAGCCCAAGAGACAGAAAGTACCCAAATGGATTGAGGCCAAACAGGGCAGCAGCCTCAGGATACTGGAAGGCAACAGGAACGGACAAGCCAATTCTTTCTTCTAGTGGATCAAAGCGCATAGGAGTGAAGAAAGCTCTGGTGTTTTATTCAGGTCGACCTCCTAAGGGATCTAAGACGGATTGGATCATGAATGAATATAGATTGATTGACACAATCACCAAATCCTCCAGGCTAAAAGGCTCCATGCGGTTGGATGACTGGGTACTATGCCGGGTTCGACATAAAGGCTACTCTTCGAAGATATCATGTGAAAATCAAGAGAATCCTAGTGAGCTAAACCTTTCTGCAAAACTACCGAGGAGTGAAGAATATCCAACAAACATGAACTGTCGGACTGACATGATCACTGATTATCAATACAAAGACTATCAGATCATAGCCTCTATTCTTGTTGGTGCACCTGTATCTCCCACTGAAAACATGCCAAATATGAGCTTTAAGGGCTGCAAAGGCACCAATCTAGTTTCAGTTTTTGAAGATGGTTTCACTAAAGTGAATTCTCAGATGACTTTTCCTTCTTTGGACAGTTACTTCAACCCACTGGCAAGAAAATCTAATGAAGATGAACAGGATGGAAATCTCATTTCTTTTAACAGGAAGTCTGAGAACAAAATGGACGAATCACCTAGCAGGGTGTTGGCCAGTAGAGAGTTGAACTGTTATAACCAAAACCAGTCTCAAGATGACATTTTCAGTGAGAACCTACCTGACACTGGCATCAATTTCCAAGAGCTTAACGATTTAGTCTTTACAGGAAGGTACCCTCAGTGA 1044 0.4215 MEGDQLSSGYSFPPGFRFHPSDEELIVHYLQNKISSRPLPASIIAEIDLYKYNPWELPNKSLFGEEEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDKPILSSSGSKRIGVKKALVFYSGRPPKGSKTDWIMNEYRLIDTITKSSRLKGSMRLDDWVLCRVRHKGYSSKISCENQENPSELNLSAKLPRSEEYPTNMNCRTDMITDYQYKDYQIIASILVGAPVSPTENMPNMSFKGCKGTNLVSVFEDGFTKVNSQMTFPSLDSYFNPLARKSNEDEQDGNLISFNRKSENKMDESPSRVLASRELNCYNQNQSQDDIFSENLPDTGINFQELNDLVFTGRYPQ* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02038 347 Gene3D NAC domain 21 169 IPR036093 GO:0003677|GO:0006355
Phac5g02038 347 ProSiteProfiles NAC domain profile. 12 166 IPR003441 GO:0003677|GO:0006355
Phac5g02038 347 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 277 - -
Phac5g02038 347 FunFam NAC transcription factor 21 170 - -
Phac5g02038 347 Pfam No apical meristem (NAM) protein 13 139 IPR003441 GO:0003677|GO:0006355
Phac5g02038 347 SUPERFAMILY NAC domain 9 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02038 Phac-Chr5 40311894 40314700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02038 5 177 NAC Transcription Factor Family AT1G69490 65.318 2.79e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac5g02038 NAM 2.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02038 - - vra:106759457 665.611