Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02035 ATGATGTCTGGTGAAGCAATAACTGTCCCTTCCAACCTCGGAGATTCCTCGGTTCAAGTCCATGACCCAAACTCAAACCCTAATCCTAACCCTAATCCAAACTCATCGGTTAAGAGAAAAAGAAGCCTACCCGGAACACCAGCAGATCCGAATGCAGAAGTGATTGCTCTGTCGCCAAAGTCGCTGATGGCGACGAACCGGTTCATCTGCGAAGTGTGCAACAAGGGCTTTCAGCGAGACCAGAACCTGCAGCTGCATCGGCGAGGGCACAATTTGCCGTGGAAGCTGCGGCAGAGGACGAAGGAAGAGGTGAGGAAGAAGGTGTACGTGTGTCCAGAGAAGAGTTGCGTGCACCATGACCCTTGCAGAGCCCTGGGAGACCTCACTGGGATAAAAAAACACTTCAGCAGAAAGCACGGTGAGAAGAAGTGGAAGTGCGAAAAGTGCTCCAAGAAATACGCTGTTCAATCTGACTGGAAAGCCCATAACAAGATTTGTGGGACTAGACAGTACAAATGTGACTGTGGCACGATATTCTCCAGGAAGGACAGCTTTGTAACACATAGAGCCTTTTGTGACGCTATGGTGGAACAAAGTACGAGACTTCCGGCAGTTTTATCAAACCACCTTGGAAACGATATTTTGATGAACGCTCAAGGCCCGAGGGTAATGCCTCAGGGTCTACAATTACACGGGTTTCATTCAGAGTTTGGTGGGCCAGGTCCAGAATCATACATGGGGAATTTTGCTGATGCTGAACATGTTGAACATAAGCTAAGGTTGCCGTTATGGCTAGACCAGACAAATCTTCAACTCAACCATCCTCTTGGCGTTGTTCCAGGCAACTCAAGTGTATTCTCACCAGGAGCAACCTTGCCTGAAACAAACAACATTTTCGGGACATCGTCGTCACAGGCACAGTGGGCGAATTACCGATACCCAGAAGCATCTTTTGCATGTGCCAGTGTTTCTATGCCTCATGGACTGAAGCTAGAGCAAGAAGACAACAAAGGGGAGTTGTCGCATTGCGTGAGCTCTTTGTACCCAAGTCACATGGAATCTACAAGGATGAGTGGTACTTCACCCTTCGACAACTCTAACTTCGGCCTGTTAGACCCGAACATGTCAAGCACGTCAACCAACAACCGGAGCAACGTGGTTGAAATTCAGAAGATATTCAAGCAAGGAAACCAGCCTGAAAACTTCAATCTCATGGTGAATTCCCAGGCAAGCAGAGGTGGGTTTTCCTTGAGTTGCAGGAAGAGTTTGGAGCATATGGTGATGCCGCAGATCGAAGAGTGGGGAAGTGGAGAAGTAGAAATAACGGAGAAGCAAGTACGTTCAAGTTCAAACACTGAAGAGCACTTAACCAAAGACTTCATGGGTGTTGGAGATGGGTCTCTAAGCAGGCAAATGGGGCCAGTGATGAACCTGCAAAGGCAGTTCCGTGGACACTACTGA 1461 0.4832 MMSGEAITVPSNLGDSSVQVHDPNSNPNPNPNPNSSVKRKRSLPGTPADPNAEVIALSPKSLMATNRFICEVCNKGFQRDQNLQLHRRGHNLPWKLRQRTKEEVRKKVYVCPEKSCVHHDPCRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHNKICGTRQYKCDCGTIFSRKDSFVTHRAFCDAMVEQSTRLPAVLSNHLGNDILMNAQGPRVMPQGLQLHGFHSEFGGPGPESYMGNFADAEHVEHKLRLPLWLDQTNLQLNHPLGVVPGNSSVFSPGATLPETNNIFGTSSSQAQWANYRYPEASFACASVSMPHGLKLEQEDNKGELSHCVSSLYPSHMESTRMSGTSPFDNSNFGLLDPNMSSTSTNNRSNVVEIQKIFKQGNQPENFNLMVNSQASRGGFSLSCRKSLEHMVMPQIEEWGSGEVEITEKQVRSSSNTEEHLTKDFMGVGDGSLSRQMGPVMNLQRQFRGHY* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02035 486 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 23 470 IPR031140 -
Phac5g02035 486 SUPERFAMILY beta-beta-alpha zinc fingers 67 164 IPR036236 -
Phac5g02035 486 Gene3D Classic Zinc Finger 123 201 - -
Phac5g02035 486 FunFam protein indeterminate-domain 12-like 47 115 - -
Phac5g02035 486 FunFam protein indeterminate-domain 5, chloroplastic-like 122 201 - -
Phac5g02035 486 Gene3D Classic Zinc Finger 49 119 - -
Phac5g02035 486 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 90 IPR013087 -
Phac5g02035 486 SMART c2h2final6 109 139 IPR013087 -
Phac5g02035 486 SMART c2h2final6 68 90 IPR013087 -
Phac5g02035 486 SMART c2h2final6 144 164 IPR013087 -
Phac5g02035 486 Pfam Zinc-finger double-stranded RNA-binding 68 90 IPR022755 -
Phac5g02035 486 MobiDBLite consensus disorder prediction 1 41 - -
Phac5g02035 486 ProSitePatterns Zinc finger C2H2 type domain signature. 70 90 IPR013087 -
Phac5g02035 486 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02035 Phac-Chr5 40287188 40290063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02035 14 201 IDZ Gene Family AT3G50700 76.596 2.79e-108 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac5g02035 zf-C2H2_jaz 8.3e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02035 K25870 - gmx:100811687 729.169