Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02026 ATGGGAGATTATAAGAGTTTTTCATTTTCCAAAATGATGGGCTGCTGTGGTTGCTTCGGATTTGTGAAAAAACCTAGACGGCGTCGGGCTAAACGTAGCACCAACAATTTTCTCTCCCATGGCCTATTATATTATGGAGAAACTGAATGTGATGAGTCGTGTAGTGGTGATGTTACTAGTAACGCCACCAGTGGAGATGATAATGAGGTTCAAGCTGTACGGAACCGTTCCGAGGATATTTTGAACTTTAGAGCTGAGAATGGCATGGTTTGTAGGCCATTTCCTGTCAAGGAGACTTTTGAACTTGTTCGCTCAGAGGATGAAAATGGGAACAAGATGATAAATGAATATGTCCGAGAGTACAAAATTGGTTCTGGAAGCTATGGCAAAGTGGCTCTTTATCGAGGTTGCTTTGACGGAAAGCATTATGCAATTAAGGCCTTTCACAAGTCTCATTTACAAAAGCTTCGTGTTGCACCCTCTGAGACTGCCATGACTGATGTTCTAAGGGAGGTACTAATTATGAAAATGGTGGAACATCCTAATATAGTCAATCTCATTGAAGTAATTGATGACTCAGAATCAGACGACTTCTACATGGTACTTGAATATGTGGAAAGCAAATGGGTGTGTGAGGGTACAGGTCGTTCCTCTGCATTAGGCGAAGAGACTGCTAGGAAATACATGCGTGATATAGTCTCAGGATTAACATATCTCCATGCTCATAATATAGTGCATGGGGATATAAAACCTGATAATCTGTTGATTACTCGTCATGGCACAGTAAAGATTGGGGATTTCAGTGTCAGCCAGGCTTTTGAGGATGGCCAAGATGAACTTCGTCGATCACCTGGCACTCCTGTTTTCACTGCACCAGAATGTTGTTTAGGTCTTACTTATCGGGGTAAAGCTTCTGACACGTGGGCCGTAGGAGTTACATTGTACTGTATGATATTGGGTGAATACCCATTTCTTGGAGATACACTTCAAGATACATATGACAAAATAGTCAATGATCCTTTACTTCTGCCAGATGACATTAACCCCCAGTTGAAGAACTTGATAGAAGGATTACTGTGCAAAGACCCAGACCAAAGGATGACATTGGGCGATGTTGCCGAGCATGTCTGGGTTATTGGAAATGATGGGCCAATTCCTGGGTACTTATGTTGGTGCAAACGCAAGAGCCTGGTTGCTGAAGATTTTGATGGGAGCAATACACTTGCTTGA 1230 0.4236 MGDYKSFSFSKMMGCCGCFGFVKKPRRRRAKRSTNNFLSHGLLYYGETECDESCSGDVTSNATSGDDNEVQAVRNRSEDILNFRAENGMVCRPFPVKETFELVRSEDENGNKMINEYVREYKIGSGSYGKVALYRGCFDGKHYAIKAFHKSHLQKLRVAPSETAMTDVLREVLIMKMVEHPNIVNLIEVIDDSESDDFYMVLEYVESKWVCEGTGRSSALGEETARKYMRDIVSGLTYLHAHNIVHGDIKPDNLLITRHGTVKIGDFSVSQAFEDGQDELRRSPGTPVFTAPECCLGLTYRGKASDTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNDPLLLPDDINPQLKNLIEGLLCKDPDQRMTLGDVAEHVWVIGNDGPIPGYLCWCKRKSLVAEDFDGSNTLA* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02026 409 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 75 380 - -
Phac5g02026 409 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Phac5g02026 409 SUPERFAMILY Protein kinase-like (PK-like) 113 385 IPR011009 -
Phac5g02026 409 FunFam Serine/threonine-protein kinase Ssp1 111 213 - -
Phac5g02026 409 FunFam Serine/threonine-protein kinase GRIK2 107 407 - -
Phac5g02026 409 SMART serkin_6 117 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02026 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Phac5g02026 409 Pfam Protein kinase domain 117 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02026 409 CDD STKc_LKB1_CaMKK 123 378 - -
Phac5g02026 409 Gene3D Transferase(Phosphotransferase) domain 1 214 384 - -
Phac5g02026 409 ProSiteProfiles Protein kinase domain profile. 117 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02026 409 Gene3D Phosphorylase Kinase; domain 1 111 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02026 Phac-Chr5 40187080 40193138 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02026 123 384 CBL-interacting serine-threonine protein kinases AT5G10930 32.959 2.99e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Phac5g02026 Pkinase 4.3e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02026 K00908 - gmx:100776013 763.066