Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02025 ATGGATGAAAATGGGAACAAGATGATAAATGAATATGTCCGAGAGTACAAAATTGGTTCTGGAAGCTATGGCAAAGTGGCTCTTTATCGAGGTTGCTTTGACGGAAAGCATTATGCAATTAAGGCCTTTCACAAGTCTCATTTACAAAAGCTTCGTGTTGCACCCTCTGAGACTGCCATGACTGATGTTCTAAGGGAGGTACTAATTATGAAAATGGTGGAACATCCTAATATAGTCAATCTCATTGAAGTAATTGATGACTCAGAATCAGACGACTTCTACATGGTACTTGAATATGTGGAAAGCAAATGGGTGTGTGAGGGTACAGGTCGTTCCTCTGCATTAGGCGAAGAGACTGCTAGGAAATACATGCGTGATATAGTCTCAGGATTAACATATCTCCATGCTCATAATATAGTGCATGGGGATATAAAACCTGATAATCTGTTGATTACTCGTCATGGCACAGTAAAGATTGGGGATTTCAGTGTCAGCCAGGCTTTTGAGGATGGCCAAGATGAACTTCGTCGATCACCTGGCACTCCTGTTTTCACTGCACCAGAATGTTGTTTAGGTCTTACTTATCGGGGTAAAGCTTCTGACACGTGGGCCGTAGGAGTTACATTGTACTGTATGATATTGGGTGAATACCCATTTCTTGGAGATACACTTCAAGATACATATGACAAAATAGTCAATGATCCTTTACTTCTGCCAGATGACATTAACCCCCAGTTGAAGAACTTGATAGAAGGATTACTGTGCAAAGACCCAGACCAAAGGATGACATTGGGCGATGTTGCCGAGCATGTCTGGGTTATTGGAAATGATGGGCCAATTCCTGGGTACTTATGTTGGTGCAAACGCAAGAGCCTGGTTGCTGAAGATTTTGATGGGAGCAATACACTTGCTTGA 915 0.4208 MDENGNKMINEYVREYKIGSGSYGKVALYRGCFDGKHYAIKAFHKSHLQKLRVAPSETAMTDVLREVLIMKMVEHPNIVNLIEVIDDSESDDFYMVLEYVESKWVCEGTGRSSALGEETARKYMRDIVSGLTYLHAHNIVHGDIKPDNLLITRHGTVKIGDFSVSQAFEDGQDELRRSPGTPVFTAPECCLGLTYRGKASDTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNDPLLLPDDINPQLKNLIEGLLCKDPDQRMTLGDVAEHVWVIGNDGPIPGYLCWCKRKSLVAEDFDGSNTLA* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02025 304 SUPERFAMILY Protein kinase-like (PK-like) 8 281 IPR011009 -
Phac5g02025 304 FunFam Serine/threonine-protein kinase GRIK2 2 302 - -
Phac5g02025 304 CDD STKc_LKB1_CaMKK 18 273 - -
Phac5g02025 304 ProSiteProfiles Protein kinase domain profile. 12 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02025 304 Gene3D Phosphorylase Kinase; domain 1 6 108 - -
Phac5g02025 304 Gene3D Transferase(Phosphotransferase) domain 1 109 279 - -
Phac5g02025 304 Pfam Protein kinase domain 12 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g02025 304 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 5 275 - -
Phac5g02025 304 FunFam Serine/threonine-protein kinase Ssp1 6 108 - -
Phac5g02025 304 PIRSF ILK 2 274 - -
Phac5g02025 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Phac5g02025 304 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Phac5g02025 304 SMART serkin_6 12 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02025 Phac-Chr5 40187080 40193138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02025 1 279 CBL-interacting serine-threonine protein kinases AT5G10930 32.042 8.38e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Phac5g02025 Pkinase 1.7e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02025 K00908 - gmx:100776013 584.334