Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01996 ATGAAGGACTCTTGGTTTTTCGATAATAACTTCAATGGTCTGTCAGATGATATTTTTGATGATGTCGTGGGTTTTTTTGATTTCCCACTGGAAGATGTAGAAGAAGACTGGGATTCTCAATTTAAATGCCTTGAAGACCAACATTCTGAGATTTTTTCAGCGTCGTCAAATGGGCTGTGTGGCAAAACTCAAACTGAAAACCCCCAACTTGGGACGGAGTTCTCTGTTTCTTGTAATGGGATTTCCCCAATAAAACAGCTGGCAAAGGCTCCTGGACCAACATATGGAAAAACCATTCCCCTCAAGAATGTCACTTTCAATGGAAAAGATTTGCATCAATTCCGAACCTACAGCCCAGTTTCAGTTTTTGAAAGCAGCAGTTCTTCCTCTGTTGAGAATTCGAACTTTGACCGGCCTGTCATTCCAGTAAAGCGTGCTCGAAGTAAACGGCAGCGCCGTTCAAGCTTGAGTCCACTATTTTCCATTCCTTACATCCTTAACGCACAGGCTTTGCAAAATCAGCAAAGGACATCTGCCTCTGAATCAGATTTCAAAACAAATGTTGCTGGGAATATGTCAAACAAAGTAAAAAGCCACAGAAAAAAGGACTTGTCCCTGCTATCAGAAGATGTCGAGATGATGAGATCCTCACATCTGGTGTCAGATCCCCCCAGAAAATGCATGCATTGTGAGGTGACAAAGACCCCACAATGGAGAGAGGGACCTATGGGTCCCAAAACACTGTGCAATGCTTGTGGCGTTCGATACAGGTCTGGCCGCCTCTTTCCTGAATACCGGCCAGCAGCTAGCCCAACTTTTGTTTCATCATTGCACTCCAACTGTCACAAGAAGGTCGTGGAGATGAGAAGCAGAGTTGAGGAGGGTGTTAGGGGTTCTATGTTTGCTTCATCAAATCTCCATGGAAATTCTGTAGGATAA 939 0.4398 MKDSWFFDNNFNGLSDDIFDDVVGFFDFPLEDVEEDWDSQFKCLEDQHSEIFSASSNGLCGKTQTENPQLGTEFSVSCNGISPIKQLAKAPGPTYGKTIPLKNVTFNGKDLHQFRTYSPVSVFESSSSSSVENSNFDRPVIPVKRARSKRQRRSSLSPLFSIPYILNAQALQNQQRTSASESDFKTNVAGNMSNKVKSHRKKDLSLLSEDVEMMRSSHLVSDPPRKCMHCEVTKTPQWREGPMGPKTLCNACGVRYRSGRLFPEYRPAASPTFVSSLHSNCHKKVVEMRSRVEEGVRGSMFASSNLHGNSVG* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01996 312 ProSiteProfiles GATA-type zinc finger domain profile. 221 257 IPR000679 GO:0006355|GO:0043565
Phac5g01996 312 Pfam GATA zinc finger 227 260 IPR000679 GO:0006355|GO:0043565
Phac5g01996 312 ProSitePatterns GATA-type zinc finger domain. 227 252 IPR000679 GO:0006355|GO:0043565
Phac5g01996 312 FunFam GATA transcription factor 215 302 - -
Phac5g01996 312 CDD ZnF_GATA 226 273 IPR000679 GO:0006355|GO:0043565
Phac5g01996 312 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 222 283 - -
Phac5g01996 312 SMART GATA_3 221 271 IPR000679 GO:0006355|GO:0043565
Phac5g01996 312 Gene3D - 220 293 IPR013088 GO:0006355|GO:0008270
Phac5g01996 312 PANTHER GATA TRANSCRIPTION FACTOR 34 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01996 Phac-Chr5 39941474 39946251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01996 8 301 C2C2-Gata Transcription Factor Family AT1G08010 36.137 1.92e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac5g01996 GATA 3.5e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01996 - - gmx:100813303 480.33