Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01962 ATGATCAACATCATGAATTCAATGGGCTCAGTGAGTAACGTTAGTGTAGAGAGGGAATATGAATCTTTTTCAGCCAAGGAAGGTCCCTCAATGGTGAAAAACAAGAGGCCTCCTTCCAGAGGCAGCAAGGGGGACCGCCACATCAAGGTGAATGGGAGAGACCGCCGAGTTCGTCTATCAGCAATCTGTGCTGCTCGTATCTTCCAACTCACCCGTGAGTTAGGCAAGAAGACAGATGGTGAGACCATCGAATGGCTCTTACACAAGGCTGAGCCAGCCATTATGGCTGCCACTGGCACTGGCATTGTGCCTTCCATCACCACCTCCGTGGACACTGCCGCCACCTTCATGGCCACCACCACCACCACCTTTCTGCCACTAGACACAATTGCTGCTCAGGATTCCAACTTAGTCACCGTTGCTGCGGTTGCAAGGACAGAGCAGCCGATCCCCCCTTTCCATTTCGACTTTGAGTGGATGCAGCACTCCGATTTAGGATTTCGTGACAATTAA 513 0.5146 MINIMNSMGSVSNVSVEREYESFSAKEGPSMVKNKRPPSRGSKGDRHIKVNGRDRRVRLSAICAARIFQLTRELGKKTDGETIEWLLHKAEPAIMAATGTGIVPSITTSVDTAATFMATTTTTFLPLDTIAAQDSNLVTVAAVARTEQPIPPFHFDFEWMQHSDLGFRDN* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01962 170 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 28 126 IPR005333 GO:0003700
Phac5g01962 170 Pfam TCP family transcription factor 42 110 IPR017887 -
Phac5g01962 170 MobiDBLite consensus disorder prediction 23 47 - -
Phac5g01962 170 ProSiteProfiles TCP domain profile. 43 97 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01962 Phac-Chr5 39626328 39626840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01962 29 111 TCP Transcription Factor Family AT1G69690 62.651 1.19e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phac5g01962 TCP 2.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01962 - - pvu:PHAVU_005G132500g 299.671