Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01953 ATGGTGTCTGACGCAAGCAAGAAGAAGGCAGCACAGAAGAAGGCGGCGACGGCCGCCAAGAGAGGTGGCAAAGCGGCAGCTGCTTCTTCCAAAACGTCGTCCTCTGAGAAGCCAGCCGACAGGCTCGCCGACGGAATTGGGGAGATTCAGATTTCCGATCGAACCTGCACCGGCGTCCTCTGCTCTCATCCTCTTTCGAGGGATATTAGGATAGAATCTCTCTCAGTTACTTTCCATGGACATGATTTGATTGTTGATTCTGAATTGGAGCTAAATTATGGAAGACGTTATGGTTTGCTTGGATTAAATGGTTGTGGAAAATCTACCCTTCTTACGGCAATAGGTTGTCGAGAGCTACCTATTCCAGATCACATGGATATTTATCACCTTACCAGAGAAATTGAAGCCTCTGACATGTCTGCATTGGAGGCTGTCATAAGCTGTGATGAGGAAAGGTTGAAATTGGAGAAAGAAGCCGAAGCTTTGGCAGCTCAGGATGATGGGGGTGGCGAAACTCTTGAACGTATTTATGAACGATTGGAAGCCTTAGATGCATCAACAGCAGAAAAGCGTGCCGCTGAAATTTTATTTGGTCTTGGTTTCAACAAGCAGATGCAGGCAAAGAAGACCCGTGATTTTTCTGGTGGCTGGAGAATGAGGATAGCTTTAGCTCGAGCTCTATTTATGAACCCAACCATTCTTTTACTTGATGAACCAACCAATCACCTCGATTTGGAGGCTTGTGTGTGGCTAGAAGAGAATTTGAAAAAGTTTGACCGCATTCTGGTTGTGGTTTCACACTCCCAGGATTTCCTTAATGGTGTCTGCACAAATATCATCCACATGCAAAACAAGAAGCTGAAGCTCTATACTGGTAATTATGATCAATATGTTCAGACACGTGCTGAGCTTGAAGAGAACCAGATGAAGCAGTACAAATGGGAGCAGGAGCAAATTGCCTCTATGAAGGAATATATAGCTCGATTTGGTCATGGATCAGCAAAACTTGCACGCCAAGCCCAGAGTAAAGAGAAAACTCTTGCAAAAATGGAGCGGGGTGGACTCACAGAGAAGGTGGTAAGAGACAGAATTTTGGTATTCCGCTTTGTTGATGTGGGAAAACTTCCCCCCCCTGTCCTCCAATTTGTTGAGGTGACATTTGGTTACACTCCTGATAATCTGATCTATAAGAACCTTGACTTTGGGGTTGATTTAGACTCTAGAATTGCTCTGGTTGGACCCAATGGAGCCGGGAAGAGTACGTTACTGAAGCTAATGACTGGCGATCTGGTACCTGTAGACGGCATGGTTCGACGCCACAATCACCTTCGAATTGCACAATTTCACCAGCACTTGGCTGAAAAGTTAGACTTGGAATTATCTGCTCTCCAGTTTATGATAAAAGAGTACCCTGGAAATGAGGAGGAGAGGATGAGAGCAGCTATTGGTAAATTTGGACTGTCCGGTAAAGCGCAGGTGATGCCGATGAAGAATTTATCTGACGGGCAGAGGAGCCGCGTGATATTCGCATGGTTAGCTTTTAGACAACCTCACTTGCTACTTCTGGATGAGCCAACCAACCATTTAGATATTGAAACAATTGACTCATTGGCTGAGGCATTGAATGAATGGGACGGTGGCATGGTGCTTGTTAGTCATGATTTTAGGCTCATAAATCAAGTGGCCCACGAGATATGGGTGTGCGCTGATCAAGCTGTGACCAGATGGGAAGGTGACATTATGGATTTTAAGGAACACTTGAGATCCAAGGCAGTTTTATCTGACTGA 1788 0.453 MVSDASKKKAAQKKAATAAKRGGKAAAASSKTSSSEKPADRLADGIGEIQISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPDHMDIYHLTREIEASDMSALEAVISCDEERLKLEKEAEALAAQDDGGGETLERIYERLEALDASTAEKRAAEILFGLGFNKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEENLKKFDRILVVVSHSQDFLNGVCTNIIHMQNKKLKLYTGNYDQYVQTRAELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVRDRILVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRIALVGPNGAGKSTLLKLMTGDLVPVDGMVRRHNHLRIAQFHQHLAEKLDLELSALQFMIKEYPGNEEERMRAAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAFRQPHLLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCADQAVTRWEGDIMDFKEHLRSKAVLSD* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01953 595 Coils Coil 287 307 - -
Phac5g01953 595 CDD ABCF_EF-3 380 571 - -
Phac5g01953 595 Pfam ABC transporter 280 352 IPR032781 -
Phac5g01953 595 Pfam ABC transporter 396 527 IPR003439 GO:0005524
Phac5g01953 595 Gene3D - 363 593 IPR027417 -
Phac5g01953 595 SMART AAA_5 405 571 IPR003593 GO:0016887
Phac5g01953 595 SMART AAA_5 93 295 IPR003593 GO:0016887
Phac5g01953 595 ProSitePatterns ABC transporters family signature. 213 227 IPR017871 GO:0005524|GO:0016887
Phac5g01953 595 FunFam ATP-binding cassette sub-family F member 3 340 594 - -
Phac5g01953 595 CDD ABCF_EF-3 69 286 - -
Phac5g01953 595 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 37 590 - -
Phac5g01953 595 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 364 574 IPR027417 -
Phac5g01953 595 Pfam ABC transporter 87 241 IPR003439 GO:0005524
Phac5g01953 595 Gene3D - 69 333 IPR027417 -
Phac5g01953 595 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 380 595 IPR003439 GO:0005524
Phac5g01953 595 FunFam Abc transporter f family member 1 69 333 - -
Phac5g01953 595 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 313 IPR027417 -
Phac5g01953 595 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 69 309 IPR003439 GO:0005524
Phac5g01953 595 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01953 Phac-Chr5 39484618 39489727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01953 200 267 Calmodulin-binding Proteins AT2G36910 41.429 9.41e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01953 K06185 - gmx:100785099 1075.85