Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01935 ATGTTGTCAGAAATATTGGACATGGAAGGGATGGCCACGGAGGAATTTGTCTCATGCAACAACGATCCAACCAACATAGCCAAAGGCAAGCGCACAAAGCGGCGCTTGAGGCCTTTGTCGCCTTGTGTTGTCACCGCCGTCACTGCCACGGCCACCGCCGCCGCCGCCATGACATCAAGCTGTTCAAGTGCTTCTGGCGGCGGTGGTGGGTCGTTTTCATCAGTCACCTTGGAGGAGGAAGAGGAAGACATGGCCAATTGTTTGATTCTCCTGGCTCAAGGAAGAGGAGGAAGGGACCCTCTTCATCACAAGGAGCTATGTGATGATGTGAAGACAGAGAAGGGTGGCAACAAAATTGAATTTTATGTTTATGAGTGCAAAACATGCAACAGAACATTCCCTTCTTTTCAAGCACTTGGTGGCCACAGGGCGAGTCACAAGAAGCCCAAGGTTGAGGAAAAGAAATCCCCACCACCGCCGTTGCCACCACCACCGTCTTCCTCGTCGCAACTATTTAATTTCGAAGAAACAAAAGAGAATCACATGAAGATTAGCCCTTCAGTGTCGCTTCAATTAGGGTGTGGAAACAATAGGGGTGGTTTGAATTTCCATGGAAACAAGTCCAAGATTCACGAGTGTTCCATTTGTGGGTCAGAATTCACATCAGGACAAGCATTGGGTGGTCACATGAGGAGGCATAGGTCATCTAACAACAATAATACTAATACTAATACTGTTGTTCAGACAACAACAACAACTTCTGATGGTGCTGTTGAAGTTAAGCCTCGGAATGTTCTAGAATTAGATCTCAACCTGCCGGCGCCGGAGGACGATCTCCGGGACTCGAAGTTTCAGTTTCCGGGGAATCCGAATTCCATGATGCTGTCGGCTGCTCCGGCTTTGGTGGGATGCCATTATTAG 921 0.4853 MLSEILDMEGMATEEFVSCNNDPTNIAKGKRTKRRLRPLSPCVVTAVTATATAAAAMTSSCSSASGGGGGSFSSVTLEEEEEDMANCLILLAQGRGGRDPLHHKELCDDVKTEKGGNKIEFYVYECKTCNRTFPSFQALGGHRASHKKPKVEEKKSPPPPLPPPPSSSSQLFNFEETKENHMKISPSVSLQLGCGNNRGGLNFHGNKSKIHECSICGSEFTSGQALGGHMRRHRSSNNNNTNTNTVVQTTTTTSDGAVEVKPRNVLELDLNLPAPEDDLRDSKFQFPGNPNSMMLSAAPALVGCHY* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01935 306 SUPERFAMILY beta-beta-alpha zinc fingers 123 233 IPR036236 -
Phac5g01935 306 Gene3D Classic Zinc Finger 121 233 - -
Phac5g01935 306 ProSiteProfiles Zinc finger C2H2 type domain profile. 211 238 IPR013087 -
Phac5g01935 306 PANTHER ZINC FINGER PROTEIN ZAT5 76 287 - -
Phac5g01935 306 MobiDBLite consensus disorder prediction 225 247 - -
Phac5g01935 306 MobiDBLite consensus disorder prediction 140 171 - -
Phac5g01935 306 ProSitePatterns Zinc finger C2H2 type domain signature. 213 233 IPR013087 -
Phac5g01935 306 MobiDBLite consensus disorder prediction 231 247 - -
Phac5g01935 306 ProSiteProfiles Zinc finger C2H2 type domain profile. 124 151 IPR013087 -
Phac5g01935 306 Pfam C2H2-type zinc finger 123 149 - -
Phac5g01935 306 Pfam C2H2-type zinc finger 211 235 - -
Phac5g01935 306 ProSitePatterns Zinc finger C2H2 type domain signature. 126 146 IPR013087 -
Phac5g01935 306 SMART c2h2final6 211 233 IPR013087 -
Phac5g01935 306 SMART c2h2final6 124 146 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01935 Phac-Chr5 39283843 39286468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01935 21 306 C2H2 Transcription Factor Family AT2G28200 43.478 1.81e-62 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac5g01935 zf-C2H2_6 2.2e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01935 - - gmx:100788646 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01935 5 39283843 39286468 Phac5g01935 5 39283843 39286468 ECH