Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01931 ATGGCGAAGGGCACCGATTCCGACGAGTTCGTGTTGCTTTCTACGGTTCGGACTGGTCTGAAGAGGGAGTTCGCGTTCGCAATGAAGGCCCAATCTGAGATCTGCGGCGCTTCTCTGGGCCGAACGCGGGCCAGCAAGAACCGGCCCCACCCTCCTGTTCAGTCCACATCTTCCCGGAAACGGCCAAGGAAGACCGTGGAGCAGAAAGCGTCGGAGGACGTCTTGAGCGAGGAAGAGGCTAAGAGCGACGTTGTGGATCTTCAGAGCGACGATGAACCAAAGAATAATCACGCGGGAGAATCAGAGTCTGCGGCAATGTTGGTTTGTGAAGAGGAAAGAAAAAGTGATGTGGCCGTGGAAAATATTATCAGCGAAGAGGAGCCGAAGGTGTTGGAAACTGTTATTAGCGAAGAGGAGCCGAAGGTGTTGGAAACTGTTATCAGCGAAGAGGAGCCGAAGGTGTTGGAAACTATTATCAGCGAAGAGGAGCCGAAGGTGTTGGAAACTGTTATCAGCGAAGAGGAGCCGAAGGTGTTGGAAACTATAATCAGCGAAGAGGAGCCTGTTGTGGCTGAGACGTTGAAGGAAGAGGTTGTGGATGAGATGGCACAACCTCTTGGCGAAATTAACGAGGAATCGGAGAAGGGTGTTTTGGGAGGTAAGGTACCTAGTGGGGAAACCCTTGTTTTGGAGGATAATGACAACAAGGGGAAGAAGAAGAAGAGAATGAAAAAGCGGTTGGAGAGGCCTCAGACTGTGAGAAGGTTTACGCGGTCGTCATTGAAGGAAAAACCCGAGGAAACAAATGATGAGAAACATGTTGGTGCGGTTGGACTTGATGATGCTATTAAGAGGGAATCAGAAACTGAGGCTTCGGTGTTAATGACCACTCCTAGTTCGGGAAGATTTTCGAATTCTAGGTTGAGGAAGTTTCCTACCAAGTTGAAGGATCTTCTGGCTACGGGGATTCTTGACGGTTTGACAGTGAGGTACATGAAGGGATCAAAGGCACGAAAAAATGGAGAAACAGGGCTTCAAGGAGTGATTCAAAACTCTGGGGTTCTGTGCTTTTGTGAGAGTTGCAAGGGGGTTGAGGTTGTCTCACCCTCTGTGTTTGAGCTGCATGCTGGCAGTGCAAATAAACGTCCCCCAGAGTACATTTACATGGATAATGGGATTAGTGGATGTAACCTCCGTGATGTCATAAATGCCTGCTGCGATTTGCCATTGGAGTCAATGGAGGAAGCCGTCCAAAAACTTCTTGCTGGCTTCACTATGAACAAATCTTCCATCTGTTTGAACTGCCGAGGAGCATGCAAGGGTGTGTCGAAGCTAGTATGTGATTCTTGCATATTAAGCCTCCCTCAAACAGCCACAGTTAGTAGCAAAAAGATTTCATCACTAGTTGAACCAAGATCACCAGAGCCAGTAACGGTTAAAAAATCATTAGACTACGAGATGCAGCCAAATTCATTAGAAAATAGGGTGCAGCCAAACTTACTAAATAATGGTGTGCCGCCAAGCTCATTAAACAATGAGATGAAGCCAAATTCGTTAAATAGTGTGACGAAGCCTAATTCATCAAACAGTGTGATGAAGCCAAATTCGTTAAAGAATGGGATGAAGCACAGTGCATCTCGTGGTAAGAGTCAGGGAAGACTAACTAGGAAGGATCTACGCTTGCATAAATTGGTATTTGAAGGAGATGTTTTGCCAGATGGAACTGAAGTAGCCTACTATGCTCATGGACAGAAACTGTTGGTTGGTTACAAAAAGGGATATGGAATTTTTTGTACCTGCTGCAACTCTGAGGTCAGTGCTTCTCAGTTTGAAGCTCATGCTGGTTGGGCATCACGAAGAAAGCCTTACCTGCACATCTACACATCTAATGGAATCTCACTCCATGAGTTGTCCATCTCTTTATCTAAAGATCGGAGATTTTCCAACAATGATAATGATGATCTCTGCATCATATGTGAAGATGGAGGGGATCTTTTGTGTTGTGATGGATGCCCTAGAGCTTTTCACATAGACTGTGTCCCTTTACCATGCATTCCTAGTGGTACTTGGTATTGTAAGTATTGCCAGAATATTTTCCAGAAAGATAGGCAGGGGCAACATAATGTGAATGCTCTGGCAGCTGGAAGGATTGAAGGCACTGATATTTTGGAACAGATGAACCCCAGATGTATTCGTGTTGTCAAAACTGTAGAAGTTGACCATGGTGGATGTGCCTTGTGCAGTCGTCACAATTTCAGTAAAAGCTTTGGTCCTCGGACAGTAATTATTTGTGATCAGTGTGAGAAAGAATATCATGTTGGATGTTTGAAGGATCATAACATGCAGAACCTTGAGGAATTGCCTGAGGGGAATTGGTTTTGTAGCACAGCTTGCAATCAAATTCATTCTGCTCTGGTGGATTTGGCGGCATGTGGCGAAAAGAGTATCCCAGATTCCCTTCTAAGTTTGATAAAAAAGAAACATGAAGAGAAAAGTGTAGACATTGGTGGAGGTGTCCTTGATGTTAAATGGAGGGTTATAAATTGGAAACTAGATGATTCTGTTGAAAATAGGAAAAGGCTTTCAAAGGCTGTTGCTATCTTCCATGAAAGGTTTGATCCTATAGTCGATTCAACATCTGGCCGAGATTTCATTCCGACAATGTTGTTTGGAAGGAACATTCGGGGTCAAGATTTCAGTGGAATGTACTGTGCAGTGCTTACTGTCAATGGAGATATTGTGTGCGCCGGAGTATTTCGTGTGTTTGGGTCAGAAATTGCAGAGCTTCCATTGGTGGCAACAACTTCTGATCAACAAGGACAGGGTTATTTTCAGTGTCTATTTTCTTGTATTGAGACATTACTTGGATCTTTGAATGTGAAAAACCTTGTCCTACCAGCTGCTGAGGAAGCTGAATCGATATGGACCGGTAAATTTGGGTTTACTAAGCTAGCTCAAGATGAGATAAACAAGTATAAGAAATTTTATCGGATGATGATATTTCAAGGGACCTCAGTGTTACATAAGCCTGTTCCTGCACTATGA 3045 0.4447 MAKGTDSDEFVLLSTVRTGLKREFAFAMKAQSEICGASLGRTRASKNRPHPPVQSTSSRKRPRKTVEQKASEDVLSEEEAKSDVVDLQSDDEPKNNHAGESESAAMLVCEEERKSDVAVENIISEEEPKVLETVISEEEPKVLETVISEEEPKVLETIISEEEPKVLETVISEEEPKVLETIISEEEPVVAETLKEEVVDEMAQPLGEINEESEKGVLGGKVPSGETLVLEDNDNKGKKKKRMKKRLERPQTVRRFTRSSLKEKPEETNDEKHVGAVGLDDAIKRESETEASVLMTTPSSGRFSNSRLRKFPTKLKDLLATGILDGLTVRYMKGSKARKNGETGLQGVIQNSGVLCFCESCKGVEVVSPSVFELHAGSANKRPPEYIYMDNGISGCNLRDVINACCDLPLESMEEAVQKLLAGFTMNKSSICLNCRGACKGVSKLVCDSCILSLPQTATVSSKKISSLVEPRSPEPVTVKKSLDYEMQPNSLENRVQPNLLNNGVPPSSLNNEMKPNSLNSVTKPNSSNSVMKPNSLKNGMKHSASRGKSQGRLTRKDLRLHKLVFEGDVLPDGTEVAYYAHGQKLLVGYKKGYGIFCTCCNSEVSASQFEAHAGWASRRKPYLHIYTSNGISLHELSISLSKDRRFSNNDNDDLCIICEDGGDLLCCDGCPRAFHIDCVPLPCIPSGTWYCKYCQNIFQKDRQGQHNVNALAAGRIEGTDILEQMNPRCIRVVKTVEVDHGGCALCSRHNFSKSFGPRTVIICDQCEKEYHVGCLKDHNMQNLEELPEGNWFCSTACNQIHSALVDLAACGEKSIPDSLLSLIKKKHEEKSVDIGGGVLDVKWRVINWKLDDSVENRKRLSKAVAIFHERFDPIVDSTSGRDFIPTMLFGRNIRGQDFSGMYCAVLTVNGDIVCAGVFRVFGSEIAELPLVATTSDQQGQGYFQCLFSCIETLLGSLNVKNLVLPAAEEAESIWTGKFGFTKLAQDEINKYKKFYRMMIFQGTSVLHKPVPAL* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01931 1014 CDD PHD1_AIRE 655 695 - -
Phac5g01931 1014 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 642 719 - -
Phac5g01931 1014 MobiDBLite consensus disorder prediction 60 98 - -
Phac5g01931 1014 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 738 801 IPR013083 -
Phac5g01931 1014 MobiDBLite consensus disorder prediction 490 554 - -
Phac5g01931 1014 MobiDBLite consensus disorder prediction 207 251 - -
Phac5g01931 1014 FunFam PHD finger family protein 841 1010 - -
Phac5g01931 1014 Pfam Tify domain binding domain 347 394 IPR032308 -
Phac5g01931 1014 Pfam Tify domain binding domain 589 637 IPR032308 -
Phac5g01931 1014 SUPERFAMILY FYVE/PHD zinc finger 736 797 IPR011011 -
Phac5g01931 1014 PANTHER AUTOIMMUNE REGULATOR 58 1011 - -
Phac5g01931 1014 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 895 989 IPR016181 -
Phac5g01931 1014 ProSitePatterns Zinc finger PHD-type signature. 656 695 IPR019786 -
Phac5g01931 1014 SMART PHD_3 655 696 IPR001965 -
Phac5g01931 1014 SMART PHD_3 743 798 IPR001965 -
Phac5g01931 1014 MobiDBLite consensus disorder prediction 490 548 - -
Phac5g01931 1014 SUPERFAMILY FYVE/PHD zinc finger 643 698 IPR011011 -
Phac5g01931 1014 MobiDBLite consensus disorder prediction 38 107 - -
Phac5g01931 1014 Gene3D - 841 1009 - -
Phac5g01931 1014 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 647 713 IPR013083 -
Phac5g01931 1014 ProSiteProfiles Zinc finger PHD-type profile. 653 698 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01931 Phac-Chr5 39239714 39248086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01931 178 1011 PHD Transcription Factor Family AT2G36720 42.679 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01931 - - var:108333944 1630.15