Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01927 ATGGCTGTTGCTGGTGTGCATAATGTGACTGCGCTCGAATCTACTTTCCTGAGGGAATCCCTTTCTCAGTCGTCTGGGAGGCAAGGAGATGGAGGTAGGGGAGGCACCCGGTCGTCTTCGGTCTTGCAAATGTGGAGAGAGATTGAGGATGAGCAGGTAGGAAGACCAGTCCAGGGAAGACCTGGGGAGGTTTTACTTCAACAAAGGAGTGATGAGTTGGTTGTGGACCCCTCACATGAAGATATGCCATATAGCAACCAGAGAGAAGGGCATGTGATAGAGGATGCAGGTTTTGGTGAGAATGATTCTGAGACCTGGTCACAAAGTCAGAATGAGTTCCATGACGAACATGAGGAATTGAACAATTCTAGCCACGAAAACTCCTCTGATTTTGGAGAAGTTGAAAGGGAAAGAGTGAGGCAAATATTCAGGGAGTGGATGAATAGTGGTTCTAGGGATCGTGCATCGAATAATTCCCAAGGAAACAGGGGAGAATGGCGCGGGGAAACTGAGCAGGAAAGAGGCGGGGAAACTGAGCAGGAAAGGGTGAGTATAAGGGAGTGGGTACAGATGAGTAGCCAGCAGAGAGGTGTTTCTTCTGGGGAAAATCGGGACGAACAATCTTCTGAAACTGGTACCCAAATTGAATGTGTTCGTGATGGATTTGTTAATCAGAACGAGGGCCAAACTGAGCATACCCGGAGGGGAATCCGTAAATTATGTGGCCGACAGGTGCTGCTTGACATGCTTAAGAAGGCTCAGATGGAAAGGCAAAGAGAAGTTCAGGAATTGTTGGACCATCGGGCTGTATCTCATTTCCCCCATCGTAATCGTATTCAGGCCTTGCTTAGAGGCAGGTTCTTGAGAAATGATAGATCGATTGGTAATAACAGGTCCACTTCCATTGCAGAAAGTGAATTAGGCTTATTGAGACAGAAGCAGACTGTATCAGGTCTAAGGGAAGGATTCTTTTTTAGAAAGGACAATTTTGGTTGTAGTCAAGCAACCAGTAACCTATCTGATATCTCTTCCGAGAGTGATATTGATGTTAATGCAATTGAACAAACTGGAGCTAGCAGTTCACAAGCAGTCCCGACTGTACATTCAGAGCAATCTGGGCCTAATAACAATGGAAGTGACGGAATTGAGATACCATGTGATCAGATTTGTTCACAAGGAACCCCTTGTGAGAAATTAGACTGGCAAGTCTCTGCCGCCCATATAGAAACAAGAGATTGGGAATCATCTTCCAGTATGAGGGTTGAAAGAGGAGATGGCACTGGACAAACTGTTGCTATGATGACAACTGAAGATCCTTCTAACGACCTTACCCAACACAGCTTGCAAATTGAAGATACACAGGATGACAATATGCAAGAGTTAAGCGAGGTACATACTGAGCAATCTCAGTGGGGAGATATAACTAATGATGAAAGCAATTTATCAAATCAGGATGATCGTGTATATAGCAATATCGTTGGTGATGTAGATTTGATTGAATCTATTGCTCTGGAAGTAGAACAACAGGAAGAAGTTATAATTGAAAATGACGGAAGTGACTGGCATCAAAGTGTGGATGATCATCAGCTTAGTAACACAACAAATGAATGGCCCCAAAACATATTGGGTAGCGAAGATGGAGAAAATTCTCGTATGCAAGAGCAAGAAACCCCTGAAGTGTGGCAAGAGGATGGTGGCTTTCAAGAGGCTGTGGAAATTTGGTTAGGAGGACCTTCTGATAATGAAGTAGCTCCAGTTGGTAGAATTCATGGGTTTTATTTTCCCGAAGATGACAATGTGTACAGTGTTGAACTCAGGGAATTGCTAAGTAGGAGAAGTGTCTCAAACCTCCTTCGCAGCAGTTTTCGTGAAAGTCTTGACCAGTTGATACAATCGTATGTTGAAAGGCAAGGTCACGCTAATGTTGAATGGGAGCTGCAAGAAACAACCCCTTCTTCTCCCTTGGCAGAACAAGACTCAGGGCAACAGACTAGGGACCCAGTCGTTGGTCCTCAGAGTATTGTTAACAGCTCACTTGACCACCGCCCCTTGCCACCAACACCTCCGCCTCAGCCTTTATGGGATCGGCACTCTCGTCATGACAATTGGTCACAGAGTGACATAAATAATCAGCGCTTAGGAATTGTGCGTTCATTTGCGGGACATAACTGCTTTTCTTTAGCTGATGAGTGGGATATTGTTAATGACTTGAGAATTGACATGGTTAGGCTACAGCAAAGGATGAATAATATGCAAAGAATGCTGGAGGCCTGTATGGATATGCAGCTAGAGTTACAACGCTCAATAAGACAAGAAGTCTCTGCAGCCTTGAATCGTTCAACTGGTTCATCAGGAATACATGACCGTGTTTCACCAGACGATAAATCTAAATGGGAATGTGTGAGGAAGGGACTTTGTTGTATATGCTGTGAAAGCAATATTGATTCTTTGTTGTACAGATGTGGGCACATGTGCACGTGTTCAAAATGTGCAAATGATTTACACCAAAGTAGAAGAAAGTGTCCAATGTGTCAAGCACCAGTGGTGGAAGTGATACGTGCTTATTCTATACAATAG 2577 0.4424 MAVAGVHNVTALESTFLRESLSQSSGRQGDGGRGGTRSSSVLQMWREIEDEQVGRPVQGRPGEVLLQQRSDELVVDPSHEDMPYSNQREGHVIEDAGFGENDSETWSQSQNEFHDEHEELNNSSHENSSDFGEVERERVRQIFREWMNSGSRDRASNNSQGNRGEWRGETEQERGGETEQERVSIREWVQMSSQQRGVSSGENRDEQSSETGTQIECVRDGFVNQNEGQTEHTRRGIRKLCGRQVLLDMLKKAQMERQREVQELLDHRAVSHFPHRNRIQALLRGRFLRNDRSIGNNRSTSIAESELGLLRQKQTVSGLREGFFFRKDNFGCSQATSNLSDISSESDIDVNAIEQTGASSSQAVPTVHSEQSGPNNNGSDGIEIPCDQICSQGTPCEKLDWQVSAAHIETRDWESSSSMRVERGDGTGQTVAMMTTEDPSNDLTQHSLQIEDTQDDNMQELSEVHTEQSQWGDITNDESNLSNQDDRVYSNIVGDVDLIESIALEVEQQEEVIIENDGSDWHQSVDDHQLSNTTNEWPQNILGSEDGENSRMQEQETPEVWQEDGGFQEAVEIWLGGPSDNEVAPVGRIHGFYFPEDDNVYSVELRELLSRRSVSNLLRSSFRESLDQLIQSYVERQGHANVEWELQETTPSSPLAEQDSGQQTRDPVVGPQSIVNSSLDHRPLPPTPPPQPLWDRHSRHDNWSQSDINNQRLGIVRSFAGHNCFSLADEWDIVNDLRIDMVRLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSTGSSGIHDRVSPDDKSKWECVRKGLCCICCESNIDSLLYRCGHMCTCSKCANDLHQSRRKCPMCQAPVVEVIRAYSIQ* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01927 858 MobiDBLite consensus disorder prediction 109 135 - -
Phac5g01927 858 Pfam Zinc finger, C3HC4 type (RING finger) 803 850 - -
Phac5g01927 858 ProSiteProfiles Zinc finger RING-type profile. 806 845 IPR001841 -
Phac5g01927 858 MobiDBLite consensus disorder prediction 14 45 - -
Phac5g01927 858 Coils Coil 734 761 - -
Phac5g01927 858 MobiDBLite consensus disorder prediction 73 98 - -
Phac5g01927 858 MobiDBLite consensus disorder prediction 150 165 - -
Phac5g01927 858 CDD mRING-HC-C3HC5_NEU1 806 855 - -
Phac5g01927 858 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 787 856 IPR013083 -
Phac5g01927 858 MobiDBLite consensus disorder prediction 649 702 - -
Phac5g01927 858 MobiDBLite consensus disorder prediction 14 135 - -
Phac5g01927 858 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 858 - -
Phac5g01927 858 MobiDBLite consensus disorder prediction 185 220 - -
Phac5g01927 858 MobiDBLite consensus disorder prediction 147 220 - -
Phac5g01927 858 MobiDBLite consensus disorder prediction 649 680 - -
Phac5g01927 858 SUPERFAMILY RING/U-box 805 851 - -
Phac5g01927 858 MobiDBLite consensus disorder prediction 357 380 - -
Phac5g01927 858 MobiDBLite consensus disorder prediction 166 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01927 Phac-Chr5 39214129 39220172 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01927 806 852 C3H Transcription Factor Family AT3G06140 38.298 3.65e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01927 - - gmx:100804887 1350.88