Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01913 ATGGCGGAGGACCGGACTGAGGTGAGTGATTACAGTTCGGAGGACGAAGGAACTGAAGATTACAGGCGCGGAGGGTACCATGCGGTTCGGATTGGTGACACTTTCAAGAATGGGTGCTATGTGGTGCAGAGCAAGCTTGGTTGGGGTCATTTTTCCACTGTGTGGCTCGCTTGGGACACTAACAAATCGCGATACGTTGCCTTAAAAATTCAAAAGAGTGCTCAGCATTACACTGAAGCGGCAATGGATGAGATAAAGATTCTCAAACAAATTGCTGATGGGGATCCAGATGACAAAAAATGTGTTGTAAAGCTTTTGGATCACTTTAAGCATTCAGGACCTAATGGCCAGCATGTTTGCATGGTTTTTGAATTCCTTGGTGATAATCTTCTCACCCTTATCAAGTATAGTGATTACCGAGGTGTTCCCATTCCTATGGTCAAGGAAATTTGTTTCCATATTTTGGTGGGTTTGGATTACTTGCACCGTGAGCTTTCTGTAATACACACTGATTTGAAGCCTGAGAATGTCCTGCTTCTGTCTCCCATAGATCCATCTAAGGATCCTAGAAAATCAGGTGTTCCACTTATCCTTCCAAACACGAAGGATAAGACTGTCACAAAAAATGGGACAACAATAGCCAGTAAGAGTGTGAATGGAGATCTGACCAAGAACCAGAAAAAGAAATTGCGAAAAAAGGCTAAAAAGGCAGCCCAGGGCTGTGTTGGAAGGGAACATGCCGAGGAAGCTGAGGAGGACTCCAAAGCACCCGATGAGCAAGATGATTGTAGTAATGATGTGAAACCAAGTGTAGAATCTGGTGACAATAAACCTAATAGTCCTGTTAGTAAAGATGAATCAACAAAGACTTCTGAAAATAAGGATGTTCCTCAAGGAAGTCATGGTCAGAGAAGAGGTAGCCGCACTACAAGAAAGAAGTTGCTTGAATCTGTCAATCTTAAGTGCAAGCTGGTTGATTTTGGTAACGCTTGTTGGACCTATAAGCAATTCACAAATGATATTCAGACAAGGCAGTATAGGTGTCCTGAAGTTCTTCTTGGATCTAAATACTCGACTCCAGCAGACCTATGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCTCTGGCGATGTTCTTTTTGATCCTCATAGTGGTGACAACTATGATAGGGATGAGGTTTATAAAGAAATCTTCTGA 1197 0.4286 MAEDRTEVSDYSSEDEGTEDYRRGGYHAVRIGDTFKNGCYVVQSKLGWGHFSTVWLAWDTNKSRYVALKIQKSAQHYTEAAMDEIKILKQIADGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPIPMVKEICFHILVGLDYLHRELSVIHTDLKPENVLLLSPIDPSKDPRKSGVPLILPNTKDKTVTKNGTTIASKSVNGDLTKNQKKKLRKKAKKAAQGCVGREHAEEAEEDSKAPDEQDDCSNDVKPSVESGDNKPNSPVSKDESTKTSENKDVPQGSHGQRRGSRTTRKKLLESVNLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELASGDVLFDPHSGDNYDRDEVYKEIF* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01913 398 SMART serkin_6 40 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01913 398 Pfam Protein kinase domain 40 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01913 398 Pfam Protein kinase domain 319 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01913 398 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 10 392 - -
Phac5g01913 398 ProSiteProfiles Protein kinase domain profile. 40 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01913 398 Gene3D Transferase(Phosphotransferase) domain 1 123 398 - -
Phac5g01913 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Phac5g01913 398 MobiDBLite consensus disorder prediction 202 221 - -
Phac5g01913 398 SUPERFAMILY Protein kinase-like (PK-like) 35 384 IPR011009 -
Phac5g01913 398 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Phac5g01913 398 FunFam CMGC/SRPK protein kinase 26 125 - -
Phac5g01913 398 Gene3D Phosphorylase Kinase; domain 1 16 122 - -
Phac5g01913 398 MobiDBLite consensus disorder prediction 238 253 - -
Phac5g01913 398 MobiDBLite consensus disorder prediction 269 286 - -
Phac5g01913 398 MobiDBLite consensus disorder prediction 183 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01913 Phac-Chr5 38982817 38988209 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01913 6 392 EF-hand Containing Proteins AT5G22840 71.026 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Phac5g01913 Pkinase 1.4e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01913 K08832 - gmx:100791829 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01913 5 38982817 38988209 Phac5g01913 5 38982817 38988209 ECH