Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01912 ATGGCGGAGGACCGGACTGAGGTGAGTGATTACAGTTCGGAGGACGAAGGAACTGAAGATTACAGGCGCGGAGGGTACCATGCGGTTCGGATTGGTGACACTTTCAAGAATGGGTGCTATGTGGTGCAGAGCAAGCTTGGTTGGGGTCATTTTTCCACTGTGTGGCTCGCTTGGGACACTAACAAATCGCGATACGTTGCCTTAAAAATTCAAAAGAGTGCTCAGCATTACACTGAAGCGGCAATGGATGAGATAAAGATTCTCAAACAAATTGCTGATGGGGATCCAGATGACAAAAAATGTGTTGTAAAGCTTTTGGATCACTTTAAGCATTCAGGACCTAATGGCCAGCATGTTTGCATGGTTTTTGAATTCCTTGGTGATAATCTTCTCACCCTTATCAAGTATAGTGATTACCGAGGTGTTCCCATTCCTATGGTCAAGGAAATTTGTTTCCATATTTTGGTGGGTTTGGATTACTTGCACCGTGAGCTTTCTGTAATACACACTGATTTGAAGCCTGAGAATGTCCTGCTTCTGTCTCCCATAGATCCATCTAAGGATCCTAGAAAATCAGGTGTTCCACTTATCCTTCCAAACACGAAGGATAAGACTGTCACAAAAAATGGGACAACAATAGCCAGTAAGAGTGTGAATGGAGATCTGACCAAGAACCAGAAAAAGAAATTGCGAAAAAAGGCTAAAAAGGCAGCCCAGGGCTGTGTTGGAAGGGAACATGCCGAGGAAGCTGAGGAGGACTCCAAAGCACCCGATGAGCAAGATGATTGTAGTAATGATGTGAAACCAAGTGTAGAATCTGGTGACAATAAACCTAATAGTCCTGTTAGTAAAGATGAATCAACAAAGACTTCTGAAAATAAGGATGTTCCTCAAGGAAGTCATGGTCAGAGAAGAGGTAGCCGCACTACAAGAAAGAAGTTGCTTGAATCTGTCAATCTTAAGTGCAAGCTGGTTGATTTTGGTAACGCTTGTTGGACCTATAAGCAATTCACAAATGATATTCAGACAAGGCAGTATAGGTGTCCTGAAGTTCTTCTTGGATCTAAATACTCGACTCCAGCAGACCTATGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCTCTGGCGATGTTCTTTTTGATCCTCATAGTGGTGACAACTATGATAGGGATGAGGATCATCTAGCGTTGATGATGGAGCTTCTTGGGATGATGCCTCGCAAGATTGCACTTGGTGGGCGCTATTCCCGAGATTTTTTCAATAGATATGGCGATTTGAGACACATCCGTCGATTGCGTTTCTGGCCTCTTAATAAGGTGATGATGGAGAAGTATGATTTCAGTGAAGAAGATGCAAGTAGCATGGCTGACTTCCTTCTTCCATTACTTGATTTTGTCCCTGAAAAGAGGCCAACTGCTGCAGTCTGCCTTCAGCATCCATGGTTCAGTGCTGGTCCCCGGACTCTTGAGCCCTCAGTGGCTAATGTGCAGCATGCTGCAATTGATGGGGAAATATCTGAAAAGATGCAGAGGGAAAAAGCTGGGCAGGAGGCTGTGGAAGTTGGTATGGGGAATATGGCCATAGATGGAAATTCAAAGCAACTCTAA 1608 0.4415 MAEDRTEVSDYSSEDEGTEDYRRGGYHAVRIGDTFKNGCYVVQSKLGWGHFSTVWLAWDTNKSRYVALKIQKSAQHYTEAAMDEIKILKQIADGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPIPMVKEICFHILVGLDYLHRELSVIHTDLKPENVLLLSPIDPSKDPRKSGVPLILPNTKDKTVTKNGTTIASKSVNGDLTKNQKKKLRKKAKKAAQGCVGREHAEEAEEDSKAPDEQDDCSNDVKPSVESGDNKPNSPVSKDESTKTSENKDVPQGSHGQRRGSRTTRKKLLESVNLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELASGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVMMEKYDFSEEDASSMADFLLPLLDFVPEKRPTAAVCLQHPWFSAGPRTLEPSVANVQHAAIDGEISEKMQREKAGQEAVEVGMGNMAIDGNSKQL* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01912 535 Gene3D Transferase(Phosphotransferase) domain 1 123 483 - -
Phac5g01912 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Phac5g01912 535 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Phac5g01912 535 CDD STKc_SRPK 29 482 - -
Phac5g01912 535 MobiDBLite consensus disorder prediction 238 253 - -
Phac5g01912 535 Pfam Protein kinase domain 40 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01912 535 Pfam Protein kinase domain 319 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01912 535 Gene3D Phosphorylase Kinase; domain 1 16 122 - -
Phac5g01912 535 ProSiteProfiles Protein kinase domain profile. 40 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01912 535 SMART serkin_6 40 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01912 535 SUPERFAMILY Protein kinase-like (PK-like) 35 491 IPR011009 -
Phac5g01912 535 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 11 502 - -
Phac5g01912 535 FunFam CMGC/SRPK protein kinase 26 125 - -
Phac5g01912 535 MobiDBLite consensus disorder prediction 202 221 - -
Phac5g01912 535 FunFam Serine/threonine-protein kinase SRPK-like protein 312 482 - -
Phac5g01912 535 MobiDBLite consensus disorder prediction 269 286 - -
Phac5g01912 535 MobiDBLite consensus disorder prediction 183 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01912 Phac-Chr5 38982817 38988209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01912 6 534 EF-hand Containing Proteins AT5G22840 69.231 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Phac5g01912 Pkinase 1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01912 K08832 - gmx:100791829 1011.52