Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01895 ATGGAGCCTCCTGTAGTGAGATCTAGGGGTCGCCCGCGCAAACGGAGAAGAGAAGAGGACGGAACCGTCGCCGGCGATCCGAAAGCGTTTCCTGAGGCAAAGAAGTCGCCTCCGGTTGTACTGGTTGGTCGATACGTGCTGAAAGAGTTCCGCAGGAACACGGTTCTTCTCGGCAAAGTCGTCCGCTACGAGCGCGGATTGTACAGAGTCGTGTACGAGAGTGGCGGATTTGAGGATTTAGATAGCAGCTTGATTCGTAGGATACTTCTCCTTGATAGCTATTTTGACGATGATTTGATTAGGAGGAAAGGCGAATTGGAGGAATCGGTGTTGCCGAAAATCGCGGAGGAACGTGAGAGCAATTCCAGCGAATTGCGAGACGATTTAATGGTTGAGAACGAAGAGGAACGAAATGAAACGGACGATGAGTCGTGCGGCGAGGCCATGAATTTGAGTTCCGATGCCGAAACGCCGATTCCAACTCCACCAACGCTGCCGCCGTCTTCAGGAACAATTGGCGTTCCGGAATCGTGCGTTTTGAATCTCCTTTCAGTGTACGGATTCTTGCGGTCGTTTAGCATTCGTCTGTTTCTCAGTCCTTTTACTTTGGACGAGTTTGTAGGTGCTTTGAACTGTAAAGTTTCGAACACGTTGCTCGATGCTATTCACATTTCGCTGATGCGTGTTTTGAGACGTCACCTTGAAAACATTTCAACCGATGGCTCGCGGCGTGCAACAAAATGCCTTAGGTGCATTGATTGGCGTTTGCTTGATGCTTTGACTTGGCCTGTTTTTGCGTTTCAATATCTAGCAATTTATGGTTACACAAAGGGACCTGAGTGGAAAGGATTTTATGACGAAATCTTTTATGGCGAGTACTATTTATTGCCTGCAAGTAGGAAACTGATGATTTTGCAAATTCTCTGTGATGATGCTTTGGCATCTGAGGAGTTTAAAGCTGAAATGAGCATGCGTGAAGAATCAGAGGTTGGGATTGATTATGATAATGAAGATAGCCTAACTACTGAAATTGGGCCCAGAAGAGTTCATCCAAGATATTCCAAAACTACTGCCTGCAAGGATAGTGAAACTAAGAAGTATGTTTCAGAATTGAATGCTGAGGATGTTGATGGAAATGGAGATGAATGCCGCTTATGTGGCATGGATGGAACTTTACTTTGCTGTGATGGTTGTCCTGCTGTTTATCATTCTAGATGTATTGGTGTGATGAAGATGCATATACCAGATGGGGAATGGTATTGTCCAGAGTGCAAAATAAATATGATTGGGCCTACAATTGCACGGGGAACATCACTTAAAGGGTCTGAAGTATTTGGAATGGATTTGTATGGGCAAGTTTTCATGGGTACTTGCGACCACTTACTGGTGCTCAATGTCAACAGTGATGAATTTTGTCTTAAGTACTACAATCAGAATGATATTCCTGAAGTTCTTCAAGTCCTCTATGCATCCGAGAAACTTAGACCTATATACAATGGTATTTGCATGACAATTTTAGAATATTGGAAAATTCCAGAAAACTTCGTATCCATTTGTGTCACAAGTGTACCACAAGTAAACTTAACAAATTCGAACACAGAAGTGAAGGCAGAATACAGTTTAACATTTGCAAATGGAATTTGTGGTGATAATGGTTCTTTGGTTACAACTTGTGGTCCTGCTCCTGGAAGCAGTGACAATACGAGAACTACTGTTAATTTGAAGCATTGTGAGGAAACTGCCATGAATTCAGTAGTTTCAATTGTTAACCATCAGTCCAATCCGAAGTATGAAGATTCTTTTAACAAGTCAGCTGCAGTTGGCCCTGCTAAGTACTCCTTTGTAAGCAGCCAGTTTAATAATTATGGGCACGCAAATGACATAAGGTTGCCTATGAATTTGTCTTTGCAAACTAAAGGTGACCAATCTGGTTTTGGAAAGTGCAAAGGCAGTTTAACTAATGATTTTGTGTACACTGGTTGCTCCTATAAACCACAGTCATACATTAATTGCTATATGCACGGTGATTTTGCGGCATCCGCCGCTGCTAACCTGGCTGTTCTTTCTTCAGAGGATTCTAGATCAGTGGGTCATGTGTCTGATAACTTGGGGAAAGCAACATCTGGAAACACTTATTTGCTTGCAAAAGCATTCTCCCAAACAGCTTCACGCTTTTTTTGGCCAAGTTCTGAAAAGAAGCTTGTAGAGGTTCCAAGAGAGAGGTGTGGCTGGTGCCTTTCTTGTAAAGCCCTTATTTCAAGCAAGAAAGGATGTATGTTGAATCATGCTGCTCTAAGTGCCACCAAAAATGCAATGAAAATCCTTTCTGGTCTTGCTCCTGTAAGGATTGGAGAAGGAATCATCCCTAGCATTGCAACTTATGTTATATATATAGAGGAAAGTTTACGTGGTTTAATAGTTGGGCCCTTTTTAAGTGAATGCTATAGAAGGCATTGGCGTAAACAAGTGGAACGAGCCACATCATTCCGTGATATAAAACCCCTTTTACTCAAACTTGAGGAGAACATTCGAACAATTGCTTTTTGTGGGGACTGGATGAAGTTGATGGATGATTGGTTGGCGGAATTTTCCACAATTCAAAGTGCTACAGTAACTCTTGGAACTACACAGAAACGTGCGACATGTGGGAGGCGTAAGAAACAGTTATCTATCAATAAAGTTACAGCTGGTGCTTGTCCTGAAAATTTTACATGGTGGCATGGTGGGAAATTTTCCAAATCTGTATTTCAGAAAGCTGTTTTGCCAAAATCCATGGCCAGAAAAGCAGCTCGACAAGGTGGTTTGAGGAAAATTTTGGGTATATTATATGCTGATGGCTCTGAGATTCCTAAAAGAAGCAGACAGGTTGTATGGAGGGCTGCAGTACAAATGAGTAGGAATGCATCCCAGTTGGCCCTTCAGGTCCGTTATCTAGATTTTCATGTCAGATGGAGTGATCTGATTCGTCCTGAGCATAACCTCCTAGATGTGAAAGGTCAAGATACTGAAGCATCTGCTTTTAGGAATGCAAATATTCATGAAAAAAGAGTTGTGGAGGACAAAATTTTATATAGAGTAGCCTTTGGAAGCCAAAAACATCTTCCTTCTCGGGTAATGAAACATGTTGAAATAGAGCAAGATCCTGAAGGAAAGGAAAAATATTGGTTTTCTGAAAAACGCATTCCTTTATATTTGGTAAAAGAGTATGAAATGCGCAATGGAAAAAGGCTATCTGATGAAGAGTACCTGTACATCACATCTCAGTTGCACCGAAGGCATTTGAAAACTACCTACAAGGACATTTTTTTTTACCTTACCTGCAAGAGAGACAAACTGAACATGTTATCATGCTCTGTTTGTCAGCTGAGTGTTTTAATTGGGAATGCTCTCAAGTGCAGTGCCTGTCAAGGTTATTGTCACACGGGTTGTTCAGTGAGTTCAACTGTCTCTACGTGTGAAGAAGTTGAGTTCTTGGCCACATGTAAACAATGTCATCATGCCAAATTACTTACTCAAAAAGTGTCTTGTAATGAGTCTCCAACTAGTCCCTTGCTCTTAGAAGGACAAGAACAAAGCACTTCAGCAGTTCTGAAGGGACCAGGGCCTAAATGTGATGGTCAAGGATTGATGTCTTCTAGGACAAAGAATAGTCGATCTGACATGAAACGAGTTTCTTCTGATTTCCCTTCGGAAACAAAAGGCCGTAGCAGAAGTTGTTCTTGGGGTATTATATGGAAAAAGAAGAACAACGAAGATACAGGCTTTGATTTCAGGCTCAAGAACATTCTTCTAAAAGGAGGTTCAGGCCTGCCTCAATTGAAGCCTGTTTGTCGCTTGTGCCAGAAACCATATAAGTCTGATCTAATGTATATCTGTTGTGAAACATGTAAACGTAAGTTTTCTACCAAGATTGGTACCATGCTGAAGCTGTCGAACTTGAAGAGTCCAAACTTTTTGATGTGCTGGGCTTTAAATGTTGCAAGTGTCGCAGGATAA 3996 0.4184 MEPPVVRSRGRPRKRRREEDGTVAGDPKAFPEAKKSPPVVLVGRYVLKEFRRNTVLLGKVVRYERGLYRVVYESGGFEDLDSSLIRRILLLDSYFDDDLIRRKGELEESVLPKIAEERESNSSELRDDLMVENEEERNETDDESCGEAMNLSSDAETPIPTPPTLPPSSGTIGVPESCVLNLLSVYGFLRSFSIRLFLSPFTLDEFVGALNCKVSNTLLDAIHISLMRVLRRHLENISTDGSRRATKCLRCIDWRLLDALTWPVFAFQYLAIYGYTKGPEWKGFYDEIFYGEYYLLPASRKLMILQILCDDALASEEFKAEMSMREESEVGIDYDNEDSLTTEIGPRRVHPRYSKTTACKDSETKKYVSELNAEDVDGNGDECRLCGMDGTLLCCDGCPAVYHSRCIGVMKMHIPDGEWYCPECKINMIGPTIARGTSLKGSEVFGMDLYGQVFMGTCDHLLVLNVNSDEFCLKYYNQNDIPEVLQVLYASEKLRPIYNGICMTILEYWKIPENFVSICVTSVPQVNLTNSNTEVKAEYSLTFANGICGDNGSLVTTCGPAPGSSDNTRTTVNLKHCEETAMNSVVSIVNHQSNPKYEDSFNKSAAVGPAKYSFVSSQFNNYGHANDIRLPMNLSLQTKGDQSGFGKCKGSLTNDFVYTGCSYKPQSYINCYMHGDFAASAAANLAVLSSEDSRSVGHVSDNLGKATSGNTYLLAKAFSQTASRFFWPSSEKKLVEVPRERCGWCLSCKALISSKKGCMLNHAALSATKNAMKILSGLAPVRIGEGIIPSIATYVIYIEESLRGLIVGPFLSECYRRHWRKQVERATSFRDIKPLLLKLEENIRTIAFCGDWMKLMDDWLAEFSTIQSATVTLGTTQKRATCGRRKKQLSINKVTAGACPENFTWWHGGKFSKSVFQKAVLPKSMARKAARQGGLRKILGILYADGSEIPKRSRQVVWRAAVQMSRNASQLALQVRYLDFHVRWSDLIRPEHNLLDVKGQDTEASAFRNANIHEKRVVEDKILYRVAFGSQKHLPSRVMKHVEIEQDPEGKEKYWFSEKRIPLYLVKEYEMRNGKRLSDEEYLYITSQLHRRHLKTTYKDIFFYLTCKRDKLNMLSCSVCQLSVLIGNALKCSACQGYCHTGCSVSSTVSTCEEVEFLATCKQCHHAKLLTQKVSCNESPTSPLLLEGQEQSTSAVLKGPGPKCDGQGLMSSRTKNSRSDMKRVSSDFPSETKGRSRSCSWGIIWKKKNNEDTGFDFRLKNILLKGGSGLPQLKPVCRLCQKPYKSDLMYICCETCKRKFSTKIGTMLKLSNLKSPNFLMCWALNVASVAG* 1332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01895 1331 MobiDBLite consensus disorder prediction 1194 1234 - -
Phac5g01895 1331 MobiDBLite consensus disorder prediction 117 160 - -
Phac5g01895 1331 MobiDBLite consensus disorder prediction 1216 1230 - -
Phac5g01895 1331 SMART testlast3 176 236 IPR018501 -
Phac5g01895 1331 SMART PHD_3 1116 1165 IPR001965 -
Phac5g01895 1331 SMART PHD_3 382 425 IPR001965 -
Phac5g01895 1331 ProSiteProfiles Zinc finger PHD-type profile. 380 427 IPR019787 -
Phac5g01895 1331 Pfam DDT domain 178 233 IPR018501 -
Phac5g01895 1331 PANTHER PHD FINGER FAMILY PROTEIN 38 1302 - -
Phac5g01895 1331 Pfam PHD-finger 383 425 IPR019787 -
Phac5g01895 1331 CDD PHD2_CHD_II 383 424 - -
Phac5g01895 1331 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 373 429 IPR013083 -
Phac5g01895 1331 MobiDBLite consensus disorder prediction 117 133 - -
Phac5g01895 1331 MobiDBLite consensus disorder prediction 1 31 - -
Phac5g01895 1331 SUPERFAMILY FYVE/PHD zinc finger 375 431 IPR011011 -
Phac5g01895 1331 ProSiteProfiles DDT domain profile. 176 236 IPR018501 -
Phac5g01895 1331 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 291 322 IPR028942 -
Phac5g01895 1331 ProSitePatterns Zinc finger PHD-type signature. 383 424 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01895 Phac-Chr5 38906159 38913927 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01895 267 517 EF-hand Containing Proteins AT5G22760 46.545 7.85e-72 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Phac5g01895 DDT 3.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01895 - - gmx:100808614 2187.53