Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01873 ATGATGAATTTTGAGATCGAATCCCCTTTTTCATTTCAATCTTCATCCACCATTTCCCAATCACCACCATGCACAACACTTCATAATACTAACCCTCACCCACTTTCACATCCTTTACTTCATGCACAATTTGTAGTATCACACAAAAGGAAAGATGGGAGAAAGAAGTTCAAGGAAACTCGCCACCCAATTTATAGGGGTGTCCGACAAAGGAAGGGAAAGTGGGTTTGTGAGCTCAGGGAACCCAAGAAGACCACAAGGATTTGGTTAGGGACATACCCTACACCTGAAATGGCAGCTAGGGCACATGATGTGGGTGCCCTAGCCATTAGGGGCAACTCAGCGATTTTAAACTTTCCAAACTCAGCTTCTCTTCTTCCCATCGTTACCTCCTCTTCACCTAAAGATATTAGAGCAGCTGCAGTAAAAGCTGCTGAGAGTTTCAGACCAATCATGCTTTCTTCCTTCTCCACTTCTCACCACAAGAAAACTAGTCGCAAAGCTAATGGCAAGGAGAAAAACAATTCTGATCTGTCTTCAACTATGTTCTTCGATGAGGAGGCATTGTTTAACATGCCGGGTCTGTTGGATAGAATGGCAGAGAGTTTATGTCTTTTTCCACTACCTTCAATGGTTGATTGGGATGATCATGCTTATTTCACAGAGTTCAATTTATGGACTGATTGA 687 0.4265 MMNFEIESPFSFQSSSTISQSPPCTTLHNTNPHPLSHPLLHAQFVVSHKRKDGRKKFKETRHPIYRGVRQRKGKWVCELREPKKTTRIWLGTYPTPEMAARAHDVGALAIRGNSAILNFPNSASLLPIVTSSSPKDIRAAAVKAAESFRPIMLSSFSTSHHKKTSRKANGKEKNNSDLSSTMFFDEEALFNMPGLLDRMAESLCLFPLPSMVDWDDHAYFTEFNLWTD* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01873 228 SMART rav1_2 64 126 IPR001471 GO:0003700|GO:0006355
Phac5g01873 228 FunFam Ethylene-responsive transcription factor 2 63 121 - -
Phac5g01873 228 SUPERFAMILY DNA-binding domain 64 122 IPR016177 GO:0003677
Phac5g01873 228 CDD AP2 63 122 IPR001471 GO:0003700|GO:0006355
Phac5g01873 228 ProSiteProfiles AP2/ERF domain profile. 64 120 IPR001471 GO:0003700|GO:0006355
Phac5g01873 228 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 13 226 IPR045277 GO:0003700
Phac5g01873 228 Gene3D AP2/ERF domain 64 121 IPR036955 GO:0003700|GO:0006355
Phac5g01873 228 Pfam AP2 domain 63 112 IPR001471 GO:0003700|GO:0006355
Phac5g01873 228 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Phac5g01873 228 PRINTS Ethylene responsive element binding protein signature 86 102 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01873 Phac-Chr5 38742634 38743437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01873 49 215 AP2-EREBP Transcription Factor Family AT4G25470 52.632 1.58e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac5g01873 AP2 1.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01873 - - vum:124831015 334.724