Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01867 ATGGATGTAACCATGAACAAAGTGGAGACTGAATGTTCTTATTACTACTCTCTCTCTTCATCACCATCACCCACTTCTTCTCAAAGCCAACTCTGCAACCCCAATTCTCCATCGGAGAATTCACCATTTCATGCACAAGCAACAAAACCAGCGTTGAGTTCTCACAAGAGGAAAGCTGGGAGAAAAAAGTTTCGCGAGACACGGCATCCAGTGTATAGAGGAGTTCGTCAGAGAAACGGTGACAGATGGGTGTGTGAAGTTCGTGAACCCAACAAGAAATCAAGGATATGGCTTGGGACATACTCCACGCCAGAAATGGCAGCTAGGGCACATGACGTGGCTGTCCTAGCACTTAAGGGCACCTCTGCGGTGTTGAATTTCCCTTATTCCGTTTCTCTTCTTCCAGTTGCAAAGTCATCTTCAGCTGCAGATATCAGAGAGGCTGCAGCAAAAATTTCCGAGGTTTTTCTACCAACCAACCCTTCTTCATCCTCTACAGACGATTCAAGGGTTAAAATTGAAACTAACCCTTGTACAGTGGAGGCTGTTGCTGATTTTGCCAAGACTTTGAACAATGATGACGAGTTCAACAAATCAATGTTTTTTGACGAAGAGGCGATTTATAACATGCCAGGTTTGTTAGATAGTATGGCAGAAGGTCTTCTTATTACTCCACCTTCTATGAGGAGATTTGATTGGGACGAGGTTGATTGTGAAACAGATCTCACTCTCTGGACTTATTAA 744 0.4382 MDVTMNKVETECSYYYSLSSSPSPTSSQSQLCNPNSPSENSPFHAQATKPALSSHKRKAGRKKFRETRHPVYRGVRQRNGDRWVCEVREPNKKSRIWLGTYSTPEMAARAHDVAVLALKGTSAVLNFPYSVSLLPVAKSSSAADIREAAAKISEVFLPTNPSSSSTDDSRVKIETNPCTVEAVADFAKTLNNDDEFNKSMFFDEEAIYNMPGLLDSMAEGLLITPPSMRRFDWDEVDCETDLTLWTY* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01867 247 ProSiteProfiles AP2/ERF domain profile. 71 128 IPR001471 GO:0003700|GO:0006355
Phac5g01867 247 PRINTS Ethylene responsive element binding protein signature 72 83 IPR001471 GO:0003700|GO:0006355
Phac5g01867 247 PRINTS Ethylene responsive element binding protein signature 94 110 IPR001471 GO:0003700|GO:0006355
Phac5g01867 247 MobiDBLite consensus disorder prediction 19 67 - -
Phac5g01867 247 Gene3D AP2/ERF domain 71 130 IPR036955 GO:0003700|GO:0006355
Phac5g01867 247 CDD AP2 72 130 IPR001471 GO:0003700|GO:0006355
Phac5g01867 247 Pfam AP2 domain 70 120 IPR001471 GO:0003700|GO:0006355
Phac5g01867 247 FunFam Ethylene-responsive transcription factor 2 70 129 - -
Phac5g01867 247 SMART rav1_2 71 134 IPR001471 GO:0003700|GO:0006355
Phac5g01867 247 SUPERFAMILY DNA-binding domain 71 130 IPR016177 GO:0003677
Phac5g01867 247 MobiDBLite consensus disorder prediction 19 48 - -
Phac5g01867 247 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 20 247 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01867 Phac-Chr5 38656038 38656781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01867 49 247 AP2-EREBP Transcription Factor Family AT4G25470 45.500 2.07e-55 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac5g01867 AP2 9.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01867 - - gmx:100816109 328.176