Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01864 ATGAAGGTGGTGGCTGCTTATTTGCTTGCAGTGTTGGGAGGGAACCCATCTCCTTCTGCCACTGATATCAAACACATTCTTAGCGCAGTTGGAGCTGATGCTGAGGAGGAGTTGATTACGTTGCTCTTAGAGGAAGTTAAGGGCAAAGACTTCAACGAACTATTAGCCAGCGGAAGGGAAAAGATGTCTGCTGTATCTGGCGGTGGTGGTGCTGCAGTGGCTGTTGCTGCTGCACCAGCTGGTGGTGCTGCTGCACCTGCTGCGGAAGCAAAGGAAGAAAAGAAGGTTGAAGAGAAGGAGGAGTCGGATGATGATATGGGTTTCAGTTTGTTCGACTAA 339 0.4985 MKVVAAYLLAVLGGNPSPSATDIKHILSAVGADAEEELITLLLEEVKGKDFNELLASGREKMSAVSGGGGAAVAVAAAPAGGAAAPAAEAKEEKKVEEKEESDDDMGFSLFD* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01864 112 CDD Ribosomal_P2 1 112 IPR044076 GO:0002182|GO:0003735|GO:0022625
Phac5g01864 112 Hamap 50S ribosomal protein L12 [rpl12]. 2 112 IPR027534 GO:0003735|GO:0005840|GO:0006414
Phac5g01864 112 FunFam 60S acidic ribosomal protein P2 1 59 - -
Phac5g01864 112 PRINTS Ribosomal protein P2 signature 21 32 IPR001859 GO:0003735|GO:0005840|GO:0006412
Phac5g01864 112 PRINTS Ribosomal protein P2 signature 76 90 IPR001859 GO:0003735|GO:0005840|GO:0006412
Phac5g01864 112 Pfam 60s Acidic ribosomal protein 17 111 - -
Phac5g01864 112 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 112 IPR044076 GO:0002182|GO:0003735|GO:0022625
Phac5g01864 112 MobiDBLite consensus disorder prediction 83 112 - -
Phac5g01864 112 Gene3D - 1 59 IPR038716 -
Phac5g01864 112 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01864 Phac-Chr5 38637842 38639289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01864 1 112 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 62.500 7.64e-29 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01864 K02943 - gmx:100306264 117.857