Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01852 ATGGCGGAAGAACACCGATGCCAGGCCCCACGCTTGTGCGTCAACAATTGCGGTTTCTTTGGCAGCCCTGCCACGCAGAATCTGTGCTCGAAGTGTTACCGCGATTTGCAGCTCAAGGAGCAGCAATCTTCCAACGCGAAGATGGTTCTGAATCAGTCTCTCGTTCTTCCGGCGCCTCCGGCGCCGGTTTCTCAGCCGTCTTCTTCGAAGGCGGCGGATCTGGATTCTGCGGTGGTTGAGGAAGCGCCACGCGCGGCAGAGGAGGCGAAGGCGCCGCAGCAGAACCGGTGTATGACGTGCAGGCGGCGCGTGGGGTTGACTGGGTTCAAGTGCCGGTGCGGGATGATGCTGTGCGGGACGCACCGTTACCCGGAGCAGCACGCGTGCGAGTTCGACTTCAAGGGGATGGGGAGGGACCAGATCGCGAAGGCGAATCCGGTGGTGAAGGGCGAGAAGCTCGAGAAGATCTGA 471 0.6136 MAEEHRCQAPRLCVNNCGFFGSPATQNLCSKCYRDLQLKEQQSSNAKMVLNQSLVLPAPPAPVSQPSSSKAADLDSAVVEEAPRAAEEAKAPQQNRCMTCRRRVGLTGFKCRCGMMLCGTHRYPEQHACEFDFKGMGRDQIAKANPVVKGEKLEKI* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01852 156 MobiDBLite consensus disorder prediction 57 88 - -
Phac5g01852 156 PANTHER AN1-TYPE ZINC FINGER PROTEIN 9 156 - -
Phac5g01852 156 FunFam Zinc finger AN1-type containing 6 69 152 - -
Phac5g01852 156 SMART AN1_Zf_4 97 134 IPR000058 GO:0008270
Phac5g01852 156 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Phac5g01852 156 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Phac5g01852 156 Gene3D - 1 54 - -
Phac5g01852 156 SUPERFAMILY AN1-like Zinc finger 83 151 IPR035896 -
Phac5g01852 156 ProSiteProfiles Zinc finger AN1-type profile. 91 137 IPR000058 GO:0008270
Phac5g01852 156 Gene3D - 67 152 IPR035896 -
Phac5g01852 156 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 56 - -
Phac5g01852 156 Pfam AN1-like Zinc finger 97 133 IPR000058 GO:0008270
Phac5g01852 156 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01852 Phac-Chr5 38525414 38527221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01852 1 156 C2H2 Transcription Factor Family AT3G52800 48.045 5.22e-47 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01852 - - gmx:106795660 270.781