Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01838 ATGAATTTCCAACAATCAGAGCAAGAGGTGCCATTGCAAGAGACAGAAGCTGCATTTTCTCAACTGAACCAACAAAATTCAGTACTCTCACTCACCCTTGACGAGGTAAGCGGCAAGAACGCAAAGAGCTTAGGGTCAATGAGCATGGATGAATTCATAGCCAGCATTTGGAATGCAGAAGACATCCCACCACTGCCCGTCTATGAGGAAGCTGCAAAGAACAAAAGCGTTGCACCAGAACCCACCATTCCTCAGCCAGGCTCATTCTCTGTCCCTCCCCCAATTTGCAAGAAAACTGTTGATGAAGTCTGGTCTCAGATCCAAAAAAGCCAACCAAAGCAGCAGAATGAGGCTGACAAGAATGAAACACTCGAAAAGCAACCCACATTTGGAGAAATAACTCTGGAGGAATTCCTAGTAAAAGCTGGGGTTGTACGAGAATCAACACTATTCACTACTATATTGCCTCAGAATAATTTTGGTAACATTCCAAGCAATGTACCATTTAATACAGGTTATATATTAATAGGAACTACTGGATCTAATGTGCCTAGTAATAGATTTGAACCACATCCAATGCTGCCACAGAATAACACCTTAGTTTTAAGGAATCTCCCTACTGCAAGTGCTGCTCACTCTCAAAACTTGGGAGAATCAAGTGGTAAGGGTAAGAAAAGGATCATTAATGGTCCTCCTGATGTGGTAATAGAGAGAAGGCAGCGCAGAATGCTGAAGAATCGAGAATCAGCAGCACGATCTCGAGCAAGAAGACAGGCTTATACTGTGGAGCTTGAAGCAGAGCTGACTCATCTGAAAGATGAAAATGAAAAGCTCAAAAATGTTCTGGCTGCTGATGAACTCAAGAGGAAAGAAGCTATATCTCAGAGAAAGCCCTCAACAATGGCTGAAAAGAGGACTGAGAAGTTGAAGAAACTGAAGAGGGCTCAAAGCGCAACCTGGTGA 963 0.432 MNFQQSEQEVPLQETEAAFSQLNQQNSVLSLTLDEVSGKNAKSLGSMSMDEFIASIWNAEDIPPLPVYEEAAKNKSVAPEPTIPQPGSFSVPPPICKKTVDEVWSQIQKSQPKQQNEADKNETLEKQPTFGEITLEEFLVKAGVVRESTLFTTILPQNNFGNIPSNVPFNTGYILIGTTGSNVPSNRFEPHPMLPQNNTLVLRNLPTASAAHSQNLGESSGKGKKRIINGPPDVVIERRQRRMLKNRESAARSRARRQAYTVELEAELTHLKDENEKLKNVLAADELKRKEAISQRKPSTMAEKRTEKLKKLKRAQSATW* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01838 320 MobiDBLite consensus disorder prediction 288 320 - -
Phac5g01838 320 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 23 319 IPR043452 GO:0003700|GO:0045893
Phac5g01838 320 MobiDBLite consensus disorder prediction 288 314 - -
Phac5g01838 320 Gene3D - 236 293 - -
Phac5g01838 320 SMART brlzneu 234 296 IPR004827 GO:0003700|GO:0006355
Phac5g01838 320 MobiDBLite consensus disorder prediction 107 127 - -
Phac5g01838 320 Coils Coil 261 288 - -
Phac5g01838 320 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 236 291 - -
Phac5g01838 320 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 241 256 IPR004827 GO:0003700|GO:0006355
Phac5g01838 320 Pfam bZIP transcription factor 238 282 IPR004827 GO:0003700|GO:0006355
Phac5g01838 320 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 236 280 IPR004827 GO:0003700|GO:0006355
Phac5g01838 320 SUPERFAMILY Leucine zipper domain 238 282 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01838 Phac-Chr5 38438894 38441540 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01838 22 320 bZIP Transcription Factor Family AT3G44460 43.226 1.79e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac5g01838 bZIP_1 1.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01838 K14432 - gmx:100799576 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01838 5 38438894 38441540 Phac5g01838 5 38438894 38441540 ECH