Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01836 ATGGATGGTAACGATGCTTTTTGCTACCCATATCATATTGATGATTGCATGACTCTAGAGAAATGGCCCAAGGGACCTCAGGATTCAGAAATGCTTCCCAGAAGAAAGGGAGCTGGTTCAACATCAGAGAAACCACTTGATGCAAAGACTCTAAGACGTTTAGCTCAAAACAGAGAGGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAACTAGAATCAAGTAGATTAAAGCTTACCCAGATAGAACAAGAACTCCAAAGAGCACGCTCTCAGGGCTTGTTCGTGGATTGTGGTGGTGTTGGAGGCAATGTAAGCTCTGCAGGAGCCGCAATGTTTGACATGGAATATGGACGATGGTTAGAAGAAGACCACAGGCTAATGGGAGAGCTCCGGAACGGGTTGCAAGTACCCTTATCAGATAGTGATATGAGAGTGATGGTGGATGGATATCTCTCCCACTATGATGAGATTTTCAGGGTCAAGGGTGTGGCTGCTAAATCAGATGTGTTTCACCTTATCAATGGCATGTGGACTTCCCAAGCTGAACGTTGCTTTCTCTGGATTGGTGGTTTTAGACCCTCTGATCTCATCACGATGCTGATTCAACAATTGGAGCCACTAGCTGAGCAACAGATAATGGGGATGTATGGCTTGAGACACTCATCACAGCAAGCAGAAGAAGCACTCTCTCAGGGCCTTGAACAGTTGCAGCAATCTTTGGTGGACACCATTGCCGGAGGCCCAGTTGTTGATGGTGTGCAACAAATGGTCGTTGCCATGAGCAAACTAGCCAATCTTGAAGGATTTGTTCGTCAGGCTGATAATTTGAGGCAACAAACACTTCATCAGTTATGTCGATTACTCACAGTTCGTCAAGCTGCAAGATGTTTCATTGTCATTGGAGAATACTATGGACGTCTTCGAGCCCTTAGTTCTCTCTGGGCATCTAGACCAAGAGAGAGCTTGATCGGTGATGATAACTCATGTCAAACAACAACCGAAATGCAAGTGGTCCAAAATCATTTCTCAAGTTTCTGA 1050 0.4533 MDGNDAFCYPYHIDDCMTLEKWPKGPQDSEMLPRRKGAGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQIEQELQRARSQGLFVDCGGVGGNVSSAGAAMFDMEYGRWLEEDHRLMGELRNGLQVPLSDSDMRVMVDGYLSHYDEIFRVKGVAAKSDVFHLINGMWTSQAERCFLWIGGFRPSDLITMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLEQLQQSLVDTIAGGPVVDGVQQMVVAMSKLANLEGFVRQADNLRQQTLHQLCRLLTVRQAARCFIVIGEYYGRLRALSSLWASRPRESLIGDDNSCQTTTEMQVVQNHFSSF* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01836 349 Gene3D - 48 97 - -
Phac5g01836 349 ProSiteProfiles DOG1 domain profile. 113 321 IPR025422 GO:0006351|GO:0043565
Phac5g01836 349 FunFam BZIP family transcription factor 48 97 - -
Phac5g01836 349 Coils Coil 68 95 - -
Phac5g01836 349 SMART brlzneu 45 110 IPR004827 GO:0003700|GO:0006355
Phac5g01836 349 Pfam Seed dormancy control 131 205 IPR025422 GO:0006351|GO:0043565
Phac5g01836 349 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 52 67 IPR004827 GO:0003700|GO:0006355
Phac5g01836 349 Pfam bZIP transcription factor 48 84 IPR004827 GO:0003700|GO:0006355
Phac5g01836 349 SUPERFAMILY Leucine zipper domain 49 92 IPR046347 GO:0003700|GO:0006355
Phac5g01836 349 PANTHER TRANSCRIPTION FACTOR TGA9 39 324 - -
Phac5g01836 349 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 47 91 IPR004827 GO:0003700|GO:0006355
Phac5g01836 349 MobiDBLite consensus disorder prediction 25 47 - -
Phac5g01836 349 CDD bZIP_HBP1b-like 49 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01836 Phac-Chr5 38426433 38433831 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01836 23 349 bZIP Transcription Factor Family AT1G08320 71.299 1.45e-175 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac5g01836 DOG1 4.7e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01836 K14431 - gmx:100775461 567