Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01835 ATGTTCCCTTCATGGCCAATGAGATTCCAACAAACCCCAAGAGGTGGTTCAAAGTCAGGAGGGGAAAGCACTGATTCAGGTCTTTCCAGCAAAACTGAGCCCCCCTTTGAGGCAGAATCTCCCATGAGTAAAAAGGCATCTTCTTCAGATCACCAGGCTTTTGATCAGCAGCATCTGCAGCACAGACAGCAACTTCAACAGGATATGGCAAGCGATGCCGCAAGAACAGCCTCTTCACAGAATCAATCAGCAGCCAAATCACAAGAAAAGAGAAAGGGAGCTGGTTCAACATCAGAGAAACCACTTGATGCAAAGACTCTAAGACGTTTAGCTCAAAACAGAGAGGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAACTAGAATCAAGTAGATTAAAGCTTACCCAGATAGAACAAGAACTCCAAAGAGCACGCTCTCAGGGCTTGTTCGTGGATTGTGGTGGTGTTGGAGGCAATGTAAGCTCTGCAGGAGCCGCAATGTTTGACATGGAATATGGACGATGGTTAGAAGAAGACCACAGGCTAATGGGAGAGCTCCGGAACGGGTTGCAAGTACCCTTATCAGATAGTGATATGAGAGTGATGGTGGATGGATATCTCTCCCACTATGATGAGATTTTCAGGGTCAAGGGTGTGGCTGCTAAATCAGATGTGTTTCACCTTATCAATGGCATGTGGACTTCCCAAGCTGAACGTTGCTTTCTCTGGATTGGTGGTTTTAGACCCTCTGATCTCATCACGATGCTGATTCAACAATTGGAGCCACTAGCTGAGCAACAGATAATGGGGATGTATGGCTTGAGACACTCATCACAGCAAGCAGAAGAAGCACTCTCTCAGGGCCTTGAACAGTTGCAGCAATCTTTGGTGGACACCATTGCCGGAGGCCCAGTTGTTGATGGTGTGCAACAAATGGTCGTTGCCATGAGCAAACTAGCCAATCTTGAAGGATTTGTTCGTCAGGCTGATAATTTGAGGCAACAAACACTTCATCAGTTATGTCGATTACTCACAGTTCGTCAAGCTGCAAGATGTTTCATTGTCATTGGAGAATACTATGGACGTCTTCGAGCCCTTAGTTCTCTCTGGGCATCTAGACCAAGAGAGAGCTTGATCGGTGATGATAACTCATGTCAAACAACAACCGAAATGCAAGTGGTCCAAAATCATTTCTCAAGTTTCTGA 1218 0.4606 MFPSWPMRFQQTPRGGSKSGGESTDSGLSSKTEPPFEAESPMSKKASSSDHQAFDQQHLQHRQQLQQDMASDAARTASSQNQSAAKSQEKRKGAGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQIEQELQRARSQGLFVDCGGVGGNVSSAGAAMFDMEYGRWLEEDHRLMGELRNGLQVPLSDSDMRVMVDGYLSHYDEIFRVKGVAAKSDVFHLINGMWTSQAERCFLWIGGFRPSDLITMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLEQLQQSLVDTIAGGPVVDGVQQMVVAMSKLANLEGFVRQADNLRQQTLHQLCRLLTVRQAARCFIVIGEYYGRLRALSSLWASRPRESLIGDDNSCQTTTEMQVVQNHFSSF* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01835 405 MobiDBLite consensus disorder prediction 42 91 - -
Phac5g01835 405 Coils Coil 124 151 - -
Phac5g01835 405 PANTHER TRANSCRIPTION FACTOR TGA9 37 380 - -
Phac5g01835 405 FunFam BZIP family transcription factor 104 153 - -
Phac5g01835 405 MobiDBLite consensus disorder prediction 92 107 - -
Phac5g01835 405 ProSiteProfiles DOG1 domain profile. 169 377 IPR025422 GO:0006351|GO:0043565
Phac5g01835 405 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 103 147 IPR004827 GO:0003700|GO:0006355
Phac5g01835 405 Pfam Seed dormancy control 187 261 IPR025422 GO:0006351|GO:0043565
Phac5g01835 405 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 108 123 IPR004827 GO:0003700|GO:0006355
Phac5g01835 405 Pfam bZIP transcription factor 104 140 IPR004827 GO:0003700|GO:0006355
Phac5g01835 405 SMART brlzneu 101 166 IPR004827 GO:0003700|GO:0006355
Phac5g01835 405 MobiDBLite consensus disorder prediction 1 107 - -
Phac5g01835 405 Gene3D - 104 153 - -
Phac5g01835 405 MobiDBLite consensus disorder prediction 10 33 - -
Phac5g01835 405 SUPERFAMILY Leucine zipper domain 105 148 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01835 Phac-Chr5 38426433 38433831 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01835 87 405 bZIP Transcription Factor Family AT1G08320 73.065 4.31e-177 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac5g01835 DOG1 6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01835 K14431 - gmx:100775461 706.827