Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01833 ATGGCGAGCCACAGAATAGGAGAACTTGGTTTGTCTGAGTCGGGACCTTCAAGTCACCACATCCCTTATGGAGTGCTTAATGGAATTAACACTCCAGTATCAAGCTTAATCAATCAAGGATCTGCTTTTGATTTTGGGGAGCTGGAGGAAGCAATTGTTCTGCATGGAGTTAAGGGTAGAAATGATGATAGCAAAGCATCTTTATTCACAGCCAGACCTGCAGCTACACTGGAAATGTTCCCTTCATGGCCAATGAGATTCCAACAAACCCCAAGAGGTGGTTCAAAGTCAGGAGGGGAAAGCACTGATTCAGGTCTTTCCAGCAAAACTGAGCCCCCCTTTGAGGCAGAATCTCCCATGAGTAAAAAGGCATCTTCTTCAGATCACCAGGCTTTTGATCAGCAGCATCTGCAGCACAGACAGCAACTTCAACAGGATATGGCAAGCGATGCCGCAAGAACAGCCTCTTCACAGAATCAATCAGCAGCCAAATCACAAGAAAAGAGAAAGGGAGCTGGTTCAACATCAGAGAAACCACTTGATGCAAAGACTCTAAGACGTTTAGCTCAAAACAGAGAGGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAACTAGAATCAAGTAGATTAAAGCTTACCCAGATAGAACAAGAACTCCAAAGAGCACGCTCTCAGGGCTTGTTCGTGGATTGTGGTGGTGTTGGAGGCAATGTAAGCTCTGGAGCCGCAATGTTTGACATGGAATATGGACGATGGTTAGAAGAAGACCACAGGCTAATGGGAGAGCTCCGGAACGGGTTGCAAGTACCCTTATCAGATAGTGATATGAGAGTGATGGTGGATGGATATCTCTCCCACTATGATGAGATTTTCAGGGTCAAGGGTGTGGCTGCTAAATCAGATGTGTTTCACCTTATCAATGGCATGTGGACTTCCCAAGCTGAACGTTGCTTTCTCTGGATTGGTGGTTTTAGACCCTCTGATCTCATCACGATGCTGATTCAACAATTGGAGCCACTAGCTGAGCAACAGATAATGGGGATGTATGGCTTGAGACACTCATCACAGCAAGCAGAAGAAGCACTCTCTCAGGGCCTTGAACAGTTGCAGCAATCTTTGGTGGACACCATTGCCGGAGGCCCAGTTGTTGATGGTGTGCAACAAATGGTCGTTGCCATGAGCAAACTAGCCAATCTTGAAGGATTTGTTCGTCAGGCTGATAATTTGAGGCAACAAACACTTCATCAGTTATGTCGATTACTCACAGTTCGTCAAGCTGCAAGATGTTTCATTGTCATTGGAGAATACTATGGACGTCTTCGAGCCCTTAGTTCTCTCTGGGCATCTAGACCAAGAGAGAGCTTGATCGGTGATGATAACTCATGTCAAACAACAACCGAAATGCAAGTGGTCCAAAATCATTTCTCAAGTTTCTGA 1449 0.4569 MASHRIGELGLSESGPSSHHIPYGVLNGINTPVSSLINQGSAFDFGELEEAIVLHGVKGRNDDSKASLFTARPAATLEMFPSWPMRFQQTPRGGSKSGGESTDSGLSSKTEPPFEAESPMSKKASSSDHQAFDQQHLQHRQQLQQDMASDAARTASSQNQSAAKSQEKRKGAGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQIEQELQRARSQGLFVDCGGVGGNVSSGAAMFDMEYGRWLEEDHRLMGELRNGLQVPLSDSDMRVMVDGYLSHYDEIFRVKGVAAKSDVFHLINGMWTSQAERCFLWIGGFRPSDLITMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLEQLQQSLVDTIAGGPVVDGVQQMVVAMSKLANLEGFVRQADNLRQQTLHQLCRLLTVRQAARCFIVIGEYYGRLRALSSLWASRPRESLIGDDNSCQTTTEMQVVQNHFSSF* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01833 482 FunFam BZIP family transcription factor 182 231 - -
Phac5g01833 482 MobiDBLite consensus disorder prediction 88 111 - -
Phac5g01833 482 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 225 IPR004827 GO:0003700|GO:0006355
Phac5g01833 482 ProSiteProfiles DOG1 domain profile. 246 454 IPR025422 GO:0006351|GO:0043565
Phac5g01833 482 SUPERFAMILY Leucine zipper domain 183 226 IPR046347 GO:0003700|GO:0006355
Phac5g01833 482 CDD bZIP_HBP1b-like 183 233 - -
Phac5g01833 482 Coils Coil 202 229 - -
Phac5g01833 482 SMART brlzneu 179 244 IPR004827 GO:0003700|GO:0006355
Phac5g01833 482 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700|GO:0006355
Phac5g01833 482 Pfam bZIP transcription factor 182 218 IPR004827 GO:0003700|GO:0006355
Phac5g01833 482 Gene3D - 182 231 - -
Phac5g01833 482 PANTHER TRANSCRIPTION FACTOR TGA9 113 457 - -
Phac5g01833 482 MobiDBLite consensus disorder prediction 170 185 - -
Phac5g01833 482 Pfam Seed dormancy control 264 338 IPR025422 GO:0006351|GO:0043565
Phac5g01833 482 MobiDBLite consensus disorder prediction 120 169 - -
Phac5g01833 482 MobiDBLite consensus disorder prediction 80 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01833 Phac-Chr5 38426433 38433831 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01833 165 482 bZIP Transcription Factor Family AT1G08320 73.292 1.22e-177 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac5g01833 DOG1 7.9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01833 K14431 - gmx:100775461 848.966