Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01832 ATGGCGAGCCACAGAATAGGAGAACTTGGTTTGTCTGAGTCGGGACCTTCAAGTCACCACATCCCTTATGGAGTGCTTAATGGAATTAACACTCCAGTATCAAGCTTAATCAATCAAGGATCTGCTTTTGATTTTGGGGAGCTGGAGGAAGCAATTGTTCTGCATGGAGTTAAGGGTAGAAATGATGATAGCAAAGCATCTTTATTCACAGCCAGACCTGCAGCTACACTGGAAATGTTCCCTTCATGGCCAATGAGATTCCAACAAACCCCAAGAGGTGGTTCAAAGTCAGGAGGGGAAAGCACTGATTCAGGTCTTTCCAGCAAAACTGAGCCCCCCTTTGAGGCAGAATCTCCCATGAGTAAAAAGGCATCTTCTTCAGATCACCAGGCTTTTGATCAGCAGCATCTGCAGCACAGACAGCAACTTCAACAGGATATGGCAAGCGATGCCGCAAGAACAGCCTCTTCACAGAATCAATCAGCAGCCAAATCACAAGAAAAGAGAAAGGGAGCTGGTTCAACATCAGAGAAACCACTTGATGCAAAGACTCTAAGACGTTTAGCTCAAAACAGAGAGGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAACTAGAATCAAGTAGATTAAAGCTTACCCAGATAGAACAAGAACTCCAAAGAGCACGCTCTCAGGGCTTGTTCGTGGATTGTGGTGGTGTTGGAGGCAATGTAAGCTCTGCAGGAGCCGCAATGTTTGACATGGAATATGGACGATGGTTAGAAGAAGACCACAGGCTAATGGGAGAGCTCCGGAACGGGTTGCAAGTACCCTTATCAGATAGTGATATGAGAGTGATGGTGGATGGATATCTCTCCCACTATGATGAGATTTTCAGGGTCAAGGGTGTGGCTGCTAAATCAGATGTGTTTCACCTTATCAATGGCATGTGGACTTCCCAAGCTGAACGTTGCTTTCTCTGGATTGGTGGTTTTAGACCCTCTGATCTCATCACGATGCTGATTCAACAATTGGAGCCACTAGCTGAGCAACAGATAATGGGGATGTATGGCTTGAGACACTCATCACAGCAAGCAGAAGAAGCACTCTCTCAGGGCCTTGAACAGTTGCAGCAATCTTTGGTGGACACCATTGCCGGAGGCCCAGTTGTTGATGGTGTGCAACAAATGGTCGTTGCCATGAGCAAACTAGCCAATCTTGAAGGATTTGTTCGTCAGGCTGATAATTTGAGGCAACAAACACTTCATCAGTTATGTCGATTACTCACAGTTCGTCAAGCTGCAAGATGTTTCATTGTCATTGGAGAATACTATGGACGTCTTCGAGCCCTTAGTTCTCTCTGGGCATCTAGACCAAGAGAGAGCTTGATCGGTGATGATAACTCATGTCAAACAACAACCGAAATGCAAGTGGTCCAAAATCATTTCTCAAGTTTCTGA 1452 0.4573 MASHRIGELGLSESGPSSHHIPYGVLNGINTPVSSLINQGSAFDFGELEEAIVLHGVKGRNDDSKASLFTARPAATLEMFPSWPMRFQQTPRGGSKSGGESTDSGLSSKTEPPFEAESPMSKKASSSDHQAFDQQHLQHRQQLQQDMASDAARTASSQNQSAAKSQEKRKGAGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQIEQELQRARSQGLFVDCGGVGGNVSSAGAAMFDMEYGRWLEEDHRLMGELRNGLQVPLSDSDMRVMVDGYLSHYDEIFRVKGVAAKSDVFHLINGMWTSQAERCFLWIGGFRPSDLITMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLEQLQQSLVDTIAGGPVVDGVQQMVVAMSKLANLEGFVRQADNLRQQTLHQLCRLLTVRQAARCFIVIGEYYGRLRALSSLWASRPRESLIGDDNSCQTTTEMQVVQNHFSSF* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01832 483 FunFam BZIP family transcription factor 182 231 - -
Phac5g01832 483 MobiDBLite consensus disorder prediction 88 111 - -
Phac5g01832 483 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 225 IPR004827 GO:0003700|GO:0006355
Phac5g01832 483 CDD bZIP_HBP1b-like 183 233 - -
Phac5g01832 483 Coils Coil 202 229 - -
Phac5g01832 483 SMART brlzneu 179 244 IPR004827 GO:0003700|GO:0006355
Phac5g01832 483 PANTHER TRANSCRIPTION FACTOR TGA9 113 458 - -
Phac5g01832 483 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700|GO:0006355
Phac5g01832 483 Pfam bZIP transcription factor 182 218 IPR004827 GO:0003700|GO:0006355
Phac5g01832 483 Pfam Seed dormancy control 265 339 IPR025422 GO:0006351|GO:0043565
Phac5g01832 483 MobiDBLite consensus disorder prediction 170 185 - -
Phac5g01832 483 ProSiteProfiles DOG1 domain profile. 247 455 IPR025422 GO:0006351|GO:0043565
Phac5g01832 483 Gene3D - 182 231 - -
Phac5g01832 483 SUPERFAMILY Leucine zipper domain 183 226 IPR046347 GO:0003700|GO:0006355
Phac5g01832 483 MobiDBLite consensus disorder prediction 120 169 - -
Phac5g01832 483 MobiDBLite consensus disorder prediction 80 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01832 Phac-Chr5 38426433 38433831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01832 165 483 bZIP Transcription Factor Family AT1G08320 73.065 5.29e-176 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac5g01832 DOG1 7.9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01832 K14431 - gmx:100775461 844.343